ESRRA • K562 NGFTB3DNWPLAC7 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB3DNWPLAC7 data_source Factorbook Download track Download number_of_intervals 16,150 bp_covered 339,150 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR486IFJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 310,074 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_DRNGRNNNNCYCAAGGTCACN_sorted.bed.gz processed_file_md5 88ab325f55a98cc0203a8c351e90580b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_DRNGRNNNNCYCAAGGTCACN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_DRNGRNNNNCYCAAGGTCACN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588QRH_DRNGRNNNNCYCAAGGTCACN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588QRH_DRNGRNNNNCYCAAGGTCACN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6839b4ceffd8b7800780028559294b28 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588QRH;ENCODE_bigBed_id=ENCFF968PEP;PMID=34755879;Motif_sequence=DRNGRNNNNCYCAAGGTCACN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR486IFJ] [Life stage: Adult] [TFBS]
ESRRA • K562 NGFTB4DFYF2ZEV • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB4DFYF2ZEV data_source Factorbook Download track Download number_of_intervals 192 bp_covered 4,032 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR486IFJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,961 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588QRH_DRNGRNNNNCYCAAGGTCACN_filtered.bed.gz processed_file_md5 3561bb39fc7427870479a12f0a8cb4bc wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588QRH_DRNGRNNNNCYCAAGGTCACN_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588QRH_DRNGRNNNNCYCAAGGTCACN_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588QRH_DRNGRNNNNCYCAAGGTCACN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588QRH_DRNGRNNNNCYCAAGGTCACN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6839b4ceffd8b7800780028559294b28 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588QRH;ENCODE_bigBed_id=ENCFF968PEP;PMID=34755879;Motif_sequence=DRNGRNNNNCYCAAGGTCACN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR486IFJ] [Life stage: Adult] [TFBS]
ESRRA • K562 NGFTB4E2X53PXL • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB4E2X53PXL data_source Factorbook Download track Download number_of_intervals 6,819 bp_covered 129,561 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR486IFJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 121,583 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_TYCTCATCTGTRAAATGGG_sorted.bed.gz processed_file_md5 1db9f9baabd7891897b8f7c4adbc64fe wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_TYCTCATCTGTRAAATGGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_TYCTCATCTGTRAAATGGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588QRH_TYCTCATCTGTRAAATGGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588QRH_TYCTCATCTGTRAAATGGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 af7f1473d22079cfed4d72462efe45f3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588QRH;ENCODE_bigBed_id=ENCFF968PEP;PMID=34755879;Motif_sequence=TYCTCATCTGTRAAATGGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR486IFJ] [Life stage: Adult] [TFBS]
ESRRA • MCF-7 NGFTB5YQ7XCHW7 • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTB5YQ7XCHW7 data_source Factorbook Download track Download number_of_intervals 11,280 bp_covered 169,200 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR337NQP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 132,628 downloaded_date 07/10/2024 release_date 01/26/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF560XEP_RWGKRWGDGWGKRWG_sorted.bed.gz processed_file_md5 b763971a5ff61b71df531bcd048cc03c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF560XEP_RWGKRWGDGWGKRWG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF560XEP_RWGKRWGDGWGKRWG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF560XEP_RWGKRWGDGWGKRWG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF560XEP_RWGKRWGDGWGKRWG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a4aeda39b0e0f0851f1d0873a31c131f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF560XEP;ENCODE_bigBed_id=ENCFF094SPX;PMID=34755879;Motif_sequence=RWGKRWGDGWGKRWG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR337NQP] [Life stage: Adult] [TFBS]
ESRRA • HepG2 NGFTBELHRA2VOX • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBELHRA2VOX data_source Factorbook Download track Download number_of_intervals 1,097 bp_covered 12,067 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EEW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 15,555 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF770RAR_VRRGGKCARAG_sorted.bed.gz processed_file_md5 aebacc91da7d623ab403ee05f382c2c1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF770RAR_VRRGGKCARAG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF770RAR_VRRGGKCARAG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF770RAR_VRRGGKCARAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF770RAR_VRRGGKCARAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d4747df69d63a7e9a3c292ba623ab2b2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2 treated with 1 mM pyruvate for 6 hours, 1 _M forskolin for 6 hours;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF770RAR;ENCODE_bigBed_id=ENCFF702RPM;PMID=34755879;Motif_sequence=VRRGGKCARAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EEW] [Life stage: Child] [TFBS]
ESRRA • GM12878 NGFTBETGI4VAPL • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBETGI4VAPL data_source Factorbook Download track Download number_of_intervals 705 bp_covered 15,510 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DYQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 15,199 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF660PIB_CCATTTTACAGATGAGGAARCT_sorted.bed.gz processed_file_md5 77c9d70c44cadf8aeb4e1a889b17f512 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF660PIB_CCATTTTACAGATGAGGAARCT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF660PIB_CCATTTTACAGATGAGGAARCT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF660PIB_CCATTTTACAGATGAGGAARCT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF660PIB_CCATTTTACAGATGAGGAARCT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 88b634239c17e765e7015ce8334471d2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF660PIB;ENCODE_bigBed_id=ENCFF760DZX;PMID=34755879;Motif_sequence=CCATTTTACAGATGAGGAARCT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DYQ] [TFBS]
ESRRA • K562 NGFTBFPH5LYIUU • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBFPH5LYIUU data_source Factorbook Download track Download number_of_intervals 8,492 bp_covered 195,316 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR486IFJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 166,859 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_AGTTTCCTCATCTGTAAAATGGG_sorted.bed.gz processed_file_md5 8609c4fc47a7d8939a031a82c9a1a94b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_AGTTTCCTCATCTGTAAAATGGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_AGTTTCCTCATCTGTAAAATGGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588QRH_AGTTTCCTCATCTGTAAAATGGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588QRH_AGTTTCCTCATCTGTAAAATGGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7d61ca8647e2cbf63ca5ef1293d8aa24 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588QRH;ENCODE_bigBed_id=ENCFF968PEP;PMID=34755879;Motif_sequence=AGTTTCCTCATCTGTAAAATGGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR486IFJ] [Life stage: Adult] [TFBS]
ESRRA • A549 NGFTBFW5JMYZOP • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBFW5JMYZOP data_source Factorbook Download track Download number_of_intervals 1,880 bp_covered 20,680 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR473SUA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 29,127 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF039TWK_BYCAAGGTCAC_sorted.bed.gz processed_file_md5 63423fe0d89ca7f6b2603a734ec3bbd2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF039TWK_BYCAAGGTCAC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF039TWK_BYCAAGGTCAC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF039TWK_BYCAAGGTCAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF039TWK_BYCAAGGTCAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b59ab3b8fa54004ab2aec308a6a8bbd3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF039TWK;ENCODE_bigBed_id=ENCFF977FTJ;PMID=34755879;Motif_sequence=BYCAAGGTCAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR473SUA] [Life stage: Adult] [TFBS]
ESRRA • MCF-7 NGFTBGTBKF2CHH • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBGTBKF2CHH data_source Factorbook Download track Download number_of_intervals 2,306 bp_covered 32,284 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR337NQP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 20,981 downloaded_date 07/10/2024 release_date 01/26/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF560XEP_ACACACAYACACAC_filtered.bed.gz processed_file_md5 a631e54f90d872b6db852584f9b9a8cc wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF560XEP_ACACACAYACACAC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF560XEP_ACACACAYACACAC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF560XEP_ACACACAYACACAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF560XEP_ACACACAYACACAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 33e8ef31466b6de4bd13a1e87930d2b6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF560XEP;ENCODE_bigBed_id=ENCFF094SPX;PMID=34755879;Motif_sequence=ACACACAYACACAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR337NQP] [Life stage: Adult] [TFBS]
ESRRA • A549 NGFTBJN7E5KGAY • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBJN7E5KGAY data_source Factorbook Download track Download number_of_intervals 31 bp_covered 465 output_type transcription factor binding sites significant genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR473SUA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 684 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF039TWK_CATCTGTAAAATGGG_filtered.bed.gz processed_file_md5 8dcc6c63659e4630a7e2b5876535c9b6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF039TWK_CATCTGTAAAATGGG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF039TWK_CATCTGTAAAATGGG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF039TWK_CATCTGTAAAATGGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF039TWK_CATCTGTAAAATGGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1390824dcdb1e6652130cf0e0d36dc79 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF039TWK;ENCODE_bigBed_id=ENCFF977FTJ;PMID=34755879;Motif_sequence=CATCTGTAAAATGGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR473SUA] [Life stage: Adult] [TFBS]
ESRRA • GM12878 NGFTBMCFXA5NQL • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBMCFXA5NQL data_source Factorbook Download track Download number_of_intervals 1,751 bp_covered 19,261 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DYQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 27,073 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF660PIB_BYCAAGGTCAC_sorted.bed.gz processed_file_md5 835fe3ebccf28be5be6c693c8cadce40 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF660PIB_BYCAAGGTCAC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF660PIB_BYCAAGGTCAC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF660PIB_BYCAAGGTCAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF660PIB_BYCAAGGTCAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f232f19eb78a36c0558500d27565f0bc data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF660PIB;ENCODE_bigBed_id=ENCFF760DZX;PMID=34755879;Motif_sequence=BYCAAGGTCAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DYQ] [TFBS]
ESRRA • K562 NGFTBNC6WDDGQV • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBNC6WDDGQV data_source Factorbook Download track Download number_of_intervals 3,629 bp_covered 108,870 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR486IFJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 83,527 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_AAAACCCACCAAAACCAAGATGGYSAYRAR_sorted.bed.gz processed_file_md5 3e138153baf04a632bb64fc1e45a57f3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_AAAACCCACCAAAACCAAGATGGYSAYRAR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF588QRH_AAAACCCACCAAAACCAAGATGGYSAYRAR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588QRH_AAAACCCACCAAAACCAAGATGGYSAYRAR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588QRH_AAAACCCACCAAAACCAAGATGGYSAYRAR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 be2dd3594cfcfb25b71f2689b87593ff data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588QRH;ENCODE_bigBed_id=ENCFF968PEP;PMID=34755879;Motif_sequence=AAAACCCACCAAAACCAAGATGGYSAYRAR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR486IFJ] [Life stage: Adult] [TFBS]
ESRRA • K562 NGFTBNGU4VVAAQ • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBNGU4VVAAQ data_source Factorbook Download track Download number_of_intervals 1,967 bp_covered 45,241 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR486IFJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 32,929 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588QRH_AGTTTCCTCATCTGTAAAATGGG_filtered.bed.gz processed_file_md5 b482221600c2b5d180565fc5d7a9bf40 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588QRH_AGTTTCCTCATCTGTAAAATGGG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588QRH_AGTTTCCTCATCTGTAAAATGGG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588QRH_AGTTTCCTCATCTGTAAAATGGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588QRH_AGTTTCCTCATCTGTAAAATGGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7d61ca8647e2cbf63ca5ef1293d8aa24 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588QRH;ENCODE_bigBed_id=ENCFF968PEP;PMID=34755879;Motif_sequence=AGTTTCCTCATCTGTAAAATGGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR486IFJ] [Life stage: Adult] [TFBS]
ESRRA • A549 NGFTBO6ZIHOMS6 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBO6ZIHOMS6 data_source Factorbook Download track Download number_of_intervals 61 bp_covered 1,281 output_type transcription factor binding sites significant genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR473SUA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,473 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF039TWK_CCTCYCTGAGCCTCAGTTTYC_filtered.bed.gz processed_file_md5 ecce456c2d41ce3d7ea471a72722ee19 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF039TWK_CCTCYCTGAGCCTCAGTTTYC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF039TWK_CCTCYCTGAGCCTCAGTTTYC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF039TWK_CCTCYCTGAGCCTCAGTTTYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF039TWK_CCTCYCTGAGCCTCAGTTTYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f6da90e528f18c33fb43e1ae4443342a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF039TWK;ENCODE_bigBed_id=ENCFF977FTJ;PMID=34755879;Motif_sequence=CCTCYCTGAGCCTCAGTTTYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR473SUA] [Life stage: Adult] [TFBS]
ESRRA • MCF-7 NGFTBOGXET7REH • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBOGXET7REH data_source Factorbook Download track Download number_of_intervals 7,424 bp_covered 81,664 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR337NQP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 72,819 downloaded_date 07/10/2024 release_date 01/26/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF560XEP_ACACACACACA_sorted.bed.gz processed_file_md5 68fa109534014eb3a1cc06b5d3e1e063 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF560XEP_ACACACACACA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF560XEP_ACACACACACA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF560XEP_ACACACACACA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF560XEP_ACACACACACA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 df6dfeb3067231b5153d8fb8a6d356c6 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF560XEP;ENCODE_bigBed_id=ENCFF094SPX;PMID=34755879;Motif_sequence=ACACACACACA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR337NQP] [Life stage: Adult] [TFBS]
ESRRA • A549 NGFTBOTJHP6QPN • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBOTJHP6QPN data_source Factorbook Download track Download number_of_intervals 1,000 bp_covered 15,000 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR473SUA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 18,970 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF039TWK_RSYGCCCCCTRGTGG_sorted.bed.gz processed_file_md5 2c28b93cd20d5cbb297f7e510db783f1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF039TWK_RSYGCCCCCTRGTGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF039TWK_RSYGCCCCCTRGTGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF039TWK_RSYGCCCCCTRGTGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF039TWK_RSYGCCCCCTRGTGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4ab89e3164ce9a37e47efc6b36c6c82f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF039TWK;ENCODE_bigBed_id=ENCFF977FTJ;PMID=34755879;Motif_sequence=RSYGCCCCCTRGTGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR473SUA] [Life stage: Adult] [TFBS]
ESRRA • K562 NGFTBPO5U4RM26 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBPO5U4RM26 data_source Factorbook Download track Download number_of_intervals 1,031 bp_covered 19,589 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR486IFJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 13,853 downloaded_date 07/10/2024 release_date 07/07/2014 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588QRH_TYCTCATCTGTRAAATGGG_filtered.bed.gz processed_file_md5 f103920acc500fd95eb4518939f85ddc wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588QRH_TYCTCATCTGTRAAATGGG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF588QRH_TYCTCATCTGTRAAATGGG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF588QRH_TYCTCATCTGTRAAATGGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF588QRH_TYCTCATCTGTRAAATGGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 af7f1473d22079cfed4d72462efe45f3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF588QRH;ENCODE_bigBed_id=ENCFF968PEP;PMID=34755879;Motif_sequence=TYCTCATCTGTRAAATGGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR486IFJ] [Life stage: Adult] [TFBS]
ESRRA • MCF-7 NGFTBRZH5UD7JB • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBRZH5UD7JB data_source Factorbook Download track Download number_of_intervals 1,202 bp_covered 18,030 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR337NQP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 12,974 downloaded_date 07/10/2024 release_date 01/26/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF560XEP_RRGAAGGADGGAARG_filtered.bed.gz processed_file_md5 bc33c32c0c2f418426a5e3be5f7d3828 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF560XEP_RRGAAGGADGGAARG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF560XEP_RRGAAGGADGGAARG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF560XEP_RRGAAGGADGGAARG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF560XEP_RRGAAGGADGGAARG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ce133f64912c69801ce8467da55c26f9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF560XEP;ENCODE_bigBed_id=ENCFF094SPX;PMID=34755879;Motif_sequence=RRGAAGGADGGAARG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR337NQP] [Life stage: Adult] [TFBS]
ESRRA • MCF-7 NGFTBSKP2GYS4Y • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBSKP2GYS4Y data_source Factorbook Download track Download number_of_intervals 12,462 bp_covered 274,164 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR337NQP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 164,176 downloaded_date 07/10/2024 release_date 01/26/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF560XEP_RADRGARRGADRGADRGAWRGA_filtered.bed.gz processed_file_md5 a16a716063e6190cd95f4b69304fd97e wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF560XEP_RADRGARRGADRGADRGAWRGA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF560XEP_RADRGARRGADRGADRGAWRGA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF560XEP_RADRGARRGADRGADRGAWRGA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF560XEP_RADRGARRGADRGADRGAWRGA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2b0d2451f38045a2ea12fb63d4ccb7e2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF560XEP;ENCODE_bigBed_id=ENCFF094SPX;PMID=34755879;Motif_sequence=RADRGARRGADRGADRGAWRGA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR337NQP] [Life stage: Adult] [TFBS]
ESRRA • GM12878 NGFTBTQO2V5KYL • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBTQO2V5KYL data_source Factorbook Download track Download number_of_intervals 46 bp_covered 1,012 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DYQ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody ESRRA assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,207 downloaded_date 07/10/2024 release_date 08/20/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF660PIB_CCATTTTACAGATGAGGAARCT_filtered.bed.gz processed_file_md5 dd40955382005f0754ed2b44efc5b893 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF660PIB_CCATTTTACAGATGAGGAARCT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF660PIB_CCATTTTACAGATGAGGAARCT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF660PIB_CCATTTTACAGATGAGGAARCT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF660PIB_CCATTTTACAGATGAGGAARCT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 88b634239c17e765e7015ce8334471d2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF660PIB;ENCODE_bigBed_id=ENCFF760DZX;PMID=34755879;Motif_sequence=CCATTTTACAGATGAGGAARCT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding ESRRA transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000DYQ] [TFBS]