EZH2 • A673 NGENCCZ47DTXSO • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A673 TF Show metadata Download track Track metadata identifier NGENCCZ47DTXSO data_source ENCODE Download track Download number_of_intervals 7,817 bp_covered 6,519,449 output_type IDR thresholded peaks genome_build hg38 cell_type A673 biosample_type Cell line biosample_term_id EFO:0002106 tissue_category Skeletal Muscle encode_experiment_id ENCSR179SAO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 142,415 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF955JRZ.bed.gz processed_file_md5 b70990be7c50cbb11266f2ede9cc0012 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF955JRZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF955JRZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF955JRZ/@@download/ENCFF955JRZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF955JRZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 63944a928a31306cc61b27017f3f1296 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A673;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE175063;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-29,2016-05-06;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A673;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002106;is_hg38_lifted=no system_category Muscular life_stage Child track_name ENCODE A673 (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR179SAO] [Life stage: Child] [TF ChIP-seq peaks]
EZH2 • Hepatocyte NGENCDEL7YLIZT • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Hepatocyte TF Show metadata Download track Track metadata identifier NGENCDEL7YLIZT data_source ENCODE Download track Download number_of_intervals 10,965 bp_covered 14,165,794 output_type IDR thresholded peaks genome_build hg38 cell_type Hepatocyte biosample_type In vitro differentiated cells biosample_term_id CL:0000182 tissue_category Liver encode_experiment_id ENCSR384LYW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 201,441 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF552DZB.bed.gz processed_file_md5 73922c4119a9f7865d942646af9f59fe wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF552DZB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF552DZB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF552DZB/@@download/ENCFF552DZB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF552DZB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2964b96b05dd90b5f1a814279f680791 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens hepatocyte originated from H9;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,SESCC,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=embryonic 5 days;Reference=NR;External_resources=GEO:GSE101027;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-11-23,2016-04-27;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=hepatocyte;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000182;is_hg38_lifted=no system_category Digestive life_stage Embryonic track_name ENCODE Hepatocyte (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR384LYW] [Life stage: Embryonic] [TF ChIP-seq peaks]
EZH2 • Keratinocyte NGENCDTG42HA5K • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Keratinocyte TF Show metadata Download track Track metadata identifier NGENCDTG42HA5K data_source ENCODE Download track Download number_of_intervals 14,758 bp_covered 8,586,790 output_type IDR thresholded peaks genome_build hg38 cell_type Keratinocyte biosample_type Primary cell biosample_term_id CL:0000312 tissue_category Skin encode_experiment_id ENCSR000ARK biological_replicate 1 technical_replicate 1_1, 1_3 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 269,999 downloaded_date 06/12/2022 release_date 12/28/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF070STK.bed.gz processed_file_md5 2dceacaa27b0b6dc68916f17758887e6 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF070STK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF070STK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF070STK/@@download/ENCFF070STK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF070STK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 08c2fbe7a641bd6e2290c2020aa49818 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens keratinocyte male;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002418,GEO:GSM1003489;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial cell;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=malpighian cell,keratinized cell of epidermis;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000312;is_hg38_lifted=no system_category Integumentary life_stage Unknown track_name ENCODE Keratinocyte (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ARK] [TF ChIP-seq peaks]
EZH2 • A673 NGENCDUBLSHEGK • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A673 TF Show metadata Download track Track metadata identifier NGENCDUBLSHEGK data_source ENCODE Download track Download number_of_intervals 7,986 bp_covered 6,582,268 output_type optimal IDR thresholded peaks genome_build hg38 cell_type A673 biosample_type Cell line biosample_term_id EFO:0002106 tissue_category Skeletal Muscle encode_experiment_id ENCSR179SAO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 143,954 downloaded_date 06/04/2018 release_date 11/17/2017 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF790MVL.bed.gz processed_file_md5 1a3829d035387b1f20ca07e7940103f2 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF790MVL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF790MVL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF790MVL/@@download/ENCFF790MVL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF790MVL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2fb7c18073413868977293a6d9b44116 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq optimal IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A673;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE175063;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-29,2016-05-06;Submitted_track_name=IDR_final_optimal.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=A673;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE3 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002106;is_hg38_lifted=no system_category Muscular life_stage Child track_name ENCODE A673 (repl. 1, 2) TF ChIP-seq EZH2 optimal IDR thresholded peaks (narrowPeak) [Experiment: ENCSR179SAO] [Life stage: Child] [TF ChIP-seq peaks]
EZH2 • HeLa-S3 NGENCDYWITL3W5 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HeLa-S3 TF Show metadata Download track Track metadata identifier NGENCDYWITL3W5 data_source ENCODE Download track Download number_of_intervals 2,798 bp_covered 1,683,420 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000ATC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 54,143 downloaded_date 06/12/2022 release_date 01/02/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF651QWD.bed.gz processed_file_md5 cdef317eafd63f61c3e9ed4628e320b2 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF651QWD.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF651QWD.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF651QWD/@@download/ENCFF651QWD.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF651QWD.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 237e2cfc1f88e455f2771b8719116fb9 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HeLa-S3;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 31 years;Reference=PMID:32728046;External_resources=GEO:GSM1003520,UCSC-ENCODE-hg19:wgEncodeEH003086;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE HeLa-S3 (repl. 1, 2) TF ChIP-seq EZH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ATC] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • DND-41 NGENCEQ4PRKLLL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq DND-41 TF Show metadata Download track Track metadata identifier NGENCEQ4PRKLLL data_source ENCODE Download track Download number_of_intervals 1,049 bp_covered 536,543 output_type IDR thresholded peaks genome_build hg38 cell_type DND-41 biosample_type Cell line biosample_term_id EFO:0007074 tissue_category Blood encode_experiment_id ENCSR000ASW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 19,541 downloaded_date 06/12/2022 release_date 12/12/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF530RYO.bed.gz processed_file_md5 542f05ce4ffa07dfa2fd1bd965a4681d wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF530RYO.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF530RYO.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF530RYO/@@download/ENCFF530RYO.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF530RYO.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e021c7154e2ca65cc04f262d710b8049 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens DND-41;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 13 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003080,GEO:GSM1003522;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2012-03-06;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=DND-41;ENCODE_cell_slims=hematopoietic cell,T cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=ACC525;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;Bio_rep=1, 2, 3;Tech_rep=1_1, 2_1, 3_1;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0007074;is_hg38_lifted=no system_category Cardiovascular life_stage Child track_name ENCODE DND-41 (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASW] [Life stage: Child] [TF ChIP-seq peaks]
EZH2 • Astrocyte NGENCEW5A7CRYV • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Astrocyte TF Show metadata Download track Track metadata identifier NGENCEW5A7CRYV data_source ENCODE Download track Download number_of_intervals 11,345 bp_covered 12,708,866 output_type IDR thresholded peaks genome_build hg38 cell_type Astrocyte biosample_type Primary cell biosample_term_id CL:0000127 tissue_category Brain encode_experiment_id ENCSR000ARR biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 193,034 downloaded_date 06/12/2022 release_date 12/27/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF802KZA.bed.gz processed_file_md5 6e1c70c34f62084c598fed80e2d6ca52 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF802KZA.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF802KZA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF802KZA/@@download/ENCFF802KZA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF802KZA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 9b92b9259107165251aa81548be145a8 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens astrocyte;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002425,GEO:GSM1003532;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=astrocyte;ENCODE_cell_slims=neural cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=astrocytic glia;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000127;is_hg38_lifted=no system_category Nervous life_stage Unknown track_name ENCODE Astrocyte (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ARR] [TF ChIP-seq peaks]
EZH2 • Endothelial cell NGENCFE4OW4TW7 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Endothelial cell TF Show metadata Download track Track metadata identifier NGENCFE4OW4TW7 data_source ENCODE Download track Download number_of_intervals 16,192 bp_covered 19,939,058 output_type IDR thresholded peaks genome_build hg38 cell_type Endothelial cell biosample_type Primary cell biosample_term_id CL:0000115 tissue_category Umbilical Cord encode_experiment_id ENCSR000ATA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 304,056 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF539AKL.bed.gz processed_file_md5 05f9cf791d0c412f57fd04e79867fe0c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF539AKL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF539AKL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF539AKL/@@download/ENCFF539AKL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF539AKL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7068c1c416ed640a0f2b326c3db0f8af data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM1003518,UCSC-ENCODE-hg19:wgEncodeEH003084;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=endothelial cell of umbilical vein;ENCODE_cell_slims=endothelial cell,epithelial cell;ENCODE_system_slims=circulatory system,reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002618;is_hg38_lifted=no system_category Embryo life_stage Newborn track_name ENCODE Endothelial cell (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ATA] [Life stage: Newborn] [TF ChIP-seq peaks]
EZH2 • Endothelial cell NGENCFRYHWXFAM • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Endothelial cell TF Show metadata Download track Track metadata identifier NGENCFRYHWXFAM data_source ENCODE Download track Download number_of_intervals 6,164 bp_covered 1,604,728 output_type IDR thresholded peaks genome_build hg38 cell_type Endothelial cell biosample_type Primary cell biosample_term_id CL:0000115 tissue_category Umbilical Cord encode_experiment_id ENCSR000ATA biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 118,217 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF951TRG.bed.gz processed_file_md5 e1a903a7f268a59fa1cc5486a030b2e1 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF951TRG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF951TRG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF951TRG/@@download/ENCFF951TRG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF951TRG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 3533aedce210e8f4251ba3292a10f75e data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM1003518,UCSC-ENCODE-hg19:wgEncodeEH003084;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=endothelial cell of umbilical vein;ENCODE_cell_slims=endothelial cell,epithelial cell;ENCODE_system_slims=circulatory system,reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002618;is_hg38_lifted=no system_category Embryo life_stage Newborn track_name ENCODE Endothelial cell (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ATA] [Life stage: Newborn] [TF ChIP-seq peaks]
EZH2 • Fibroblast NGENCFWFL3FXLI • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Fibroblast TF Show metadata Download track Track metadata identifier NGENCFWFL3FXLI data_source ENCODE Download track Download number_of_intervals 12,287 bp_covered 7,136,038 output_type conservative IDR thresholded peaks genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Lung encode_experiment_id ENCSR000ARO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 233,092 downloaded_date 06/12/2022 release_date 08/13/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF238ZFQ.bed.gz processed_file_md5 76319edef70cd35b4cfc0fd6431c507e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF238ZFQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF238ZFQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF238ZFQ/@@download/ENCFF238ZFQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF238ZFQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 31c7c01797ca7d1a31ab92a73113b7bf data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM1003529,UCSC-ENCODE-hg19:wgEncodeEH002422;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=fibroblast of lung;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002553;is_hg38_lifted=no system_category Respiratory life_stage Adult, Child track_name ENCODE Fibroblast (repl. 1, 2) TF ChIP-seq EZH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ARO] [Life stage: Adult, Child] [TF ChIP-seq peaks]
EZH2 • SK-N-MC NGENCG3EWZELSX • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq SK-N-MC TF Show metadata Download track Track metadata identifier NGENCG3EWZELSX data_source ENCODE Download track Download number_of_intervals 3,735 bp_covered 2,325,353 output_type IDR thresholded peaks genome_build hg38 cell_type SK-N-MC biosample_type Cell line biosample_term_id EFO:0002860 tissue_category Brain encode_experiment_id ENCSR113GDB biological_replicate 1 technical_replicate 1_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 67,437 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434OHW.bed.gz processed_file_md5 83e6eb9a13423ad1515613bd2d6e364e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434OHW.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434OHW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF434OHW/@@download/ENCFF434OHW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF434OHW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b55c86d14a5928d3faf9981a350240d0 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens SK-N-MC;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=child 14 years;Reference=NR;External_resources=GEO:GSE170308;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-12-14,2015-08-03;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=SK-N-MC;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=SKNMc;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002860;is_hg38_lifted=no system_category Nervous life_stage Child track_name ENCODE SK-N-MC (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR113GDB] [Life stage: Child] [TF ChIP-seq peaks]
EZH2 • Endothelial cell NGENCGFN33RAZZ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Endothelial cell TF Show metadata Download track Track metadata identifier NGENCGFN33RAZZ data_source ENCODE Download track Download number_of_intervals 12,785 bp_covered 16,836,339 output_type conservative IDR thresholded peaks genome_build hg38 cell_type Endothelial cell biosample_type Primary cell biosample_term_id CL:0000115 tissue_category Umbilical Cord encode_experiment_id ENCSR000ATA biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 238,190 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF618TXV.bed.gz processed_file_md5 3301904fd35f54f01783938ae27d4cd5 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF618TXV.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF618TXV.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF618TXV/@@download/ENCFF618TXV.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF618TXV.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 5353c0f2e24c5b43ab3e79d1a9d8ec84 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM1003518,UCSC-ENCODE-hg19:wgEncodeEH003084;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=endothelial cell of umbilical vein;ENCODE_cell_slims=endothelial cell,epithelial cell;ENCODE_system_slims=circulatory system,reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002618;is_hg38_lifted=no system_category Embryo life_stage Newborn track_name ENCODE Endothelial cell (repl. 1, 2) TF ChIP-seq EZH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ATA] [Life stage: Newborn] [TF ChIP-seq peaks]
EZH2 • Endothelial cell NGENCGJACL2DER • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Endothelial cell TF Show metadata Download track Track metadata identifier NGENCGJACL2DER data_source ENCODE Download track Download number_of_intervals 16,463 bp_covered 24,270,697 output_type IDR thresholded peaks genome_build hg38 cell_type Endothelial cell biosample_type Primary cell biosample_term_id CL:0000115 tissue_category Umbilical Cord encode_experiment_id ENCSR000ATA biological_replicate 1 technical_replicate 1_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 291,875 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF398ZOX.bed.gz processed_file_md5 d1de8ef8836c46d3d3ccb46a4d9cd02a wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF398ZOX.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF398ZOX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF398ZOX/@@download/ENCFF398ZOX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF398ZOX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 5d090d7132f50865677232cbbd2b411f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM1003518,UCSC-ENCODE-hg19:wgEncodeEH003084;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=endothelial cell of umbilical vein;ENCODE_cell_slims=endothelial cell,epithelial cell;ENCODE_system_slims=circulatory system,reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002618;is_hg38_lifted=no system_category Embryo life_stage Newborn track_name ENCODE Endothelial cell (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ATA] [Life stage: Newborn] [TF ChIP-seq peaks]
EZH2 • Fibroblast NGENCGNOSGT2NW • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Fibroblast TF Show metadata Download track Track metadata identifier NGENCGNOSGT2NW data_source ENCODE Download track Download number_of_intervals 10,689 bp_covered 8,945,951 output_type IDR thresholded peaks genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Skin encode_experiment_id ENCSR000ASE biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 181,010 downloaded_date 06/12/2022 release_date 12/28/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF944NPQ.bed.gz processed_file_md5 bf89a9dc8af92ab284c6b6d263ae304e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF944NPQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF944NPQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF944NPQ/@@download/ENCFF944NPQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF944NPQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 329e80d101b7dd462a3e67a1aac79229 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens fibroblast of dermis;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002438,GEO:GSM1003550;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=fibroblast of dermis;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002551;is_hg38_lifted=no system_category Integumentary life_stage Unknown track_name ENCODE Fibroblast (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASE] [TF ChIP-seq peaks]
EZH2 • GM12878 NGENCGOZOWFY6R • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM12878 TF Show metadata Download track Track metadata identifier NGENCGOZOWFY6R data_source ENCODE Download track Download number_of_intervals 615 bp_covered 162,360 output_type IDR thresholded peaks genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000ARD biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 12,929 downloaded_date 06/12/2022 release_date 12/28/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF655DMP.bed.gz processed_file_md5 b9adb389fa62f6164b64ebd74b6a2d10 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF655DMP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF655DMP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF655DMP/@@download/ENCFF655DMP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF655DMP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 857aabe0abda1f44cda5febbcae04024 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM12878;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002411,GEO:GSM1003498;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM12878;ENCODE_cell_slims=hematopoietic cell,B cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE GM12878 (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ARD] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • Epithelial cell NGENCGPJ5K5MCA • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Epithelial cell TF Show metadata Download track Track metadata identifier NGENCGPJ5K5MCA data_source ENCODE Download track Download number_of_intervals 4,013 bp_covered 1,735,562 output_type IDR thresholded peaks genome_build hg38 cell_type Epithelial cell biosample_type Primary cell biosample_term_id CL:0000066 tissue_category Breast encode_experiment_id ENCSR000ARE biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 70,741 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF791ADK.bed.gz processed_file_md5 19a62c7d1cc6c7b7c5d240f3920f694d wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF791ADK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF791ADK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF791ADK/@@download/ENCFF791ADK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF791ADK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2ba5360ead61a26de15f20aabbf70b90 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens mammary epithelial cell female adult (50 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 50 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002412,GEO:GSM1003501;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=mammary epithelial cell;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=breast epithelial cell,mammary epithelial cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002327;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE Epithelial cell (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ARE] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • HCT116 NGENCGPVXU7ZVV • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HCT116 TF Show metadata Download track Track metadata identifier NGENCGPVXU7ZVV data_source ENCODE Download track Download number_of_intervals 699 bp_covered 323,571 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR046HGP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 13,203 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF041BOZ.bed.gz processed_file_md5 a7cd973f9e9af83cad18021541a8330d wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF041BOZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF041BOZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF041BOZ/@@download/ENCFF041BOZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF041BOZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2e37f1dc4ac75614a895ef91e86568ab data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HCT116;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE123197;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-18,2015-08-03;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HCT116;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=HCT116 cell,HCT-116 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name ENCODE HCT116 (repl. 1, 2) TF ChIP-seq EZH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR046HGP] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • A673 NGENCHEMJSV5H2 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A673 TF Show metadata Download track Track metadata identifier NGENCHEMJSV5H2 data_source ENCODE Download track Download number_of_intervals 2,094 bp_covered 856,135 output_type IDR thresholded peaks genome_build hg38 cell_type A673 biosample_type Cell line biosample_term_id EFO:0002106 tissue_category Skeletal Muscle encode_experiment_id ENCSR179SAO biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 36,668 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF365VJZ.bed.gz processed_file_md5 c076a7d8bdd0f3666e56dddd17b552a7 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF365VJZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF365VJZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF365VJZ/@@download/ENCFF365VJZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF365VJZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 d1b655bf568ccf104a9790c2bc0867da data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A673;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE175063;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-29,2016-05-06;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A673;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002106;is_hg38_lifted=no system_category Muscular life_stage Child track_name ENCODE A673 (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR179SAO] [Life stage: Child] [TF ChIP-seq peaks]
EZH2 • B cell NGENCHEUYSRZMH • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq B cell TF Show metadata Download track Track metadata identifier NGENCHEUYSRZMH data_source ENCODE Download track Download number_of_intervals 2,806 bp_covered 1,189,140 output_type IDR thresholded peaks genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Immune encode_experiment_id ENCSR000AUZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 53,619 downloaded_date 06/12/2022 release_date 01/05/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF803EMO.bed.gz processed_file_md5 8452e836355719cfb91be6d7556d695c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF803EMO.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF803EMO.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF803EMO/@@download/ENCFF803EMO.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF803EMO.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 1467448ae864e04ea9aab67658fbe708 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens B cell female adult (27 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 27 years;Reference=NR;External_resources=GEO:GSM1003470,UCSC-ENCODE-hg19:wgEncodeEH003135;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=B cell;ENCODE_cell_slims=hematopoietic cell,B cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=B-cell,B-lymphocyte,B lymphocyte;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000236;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name ENCODE B cell (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000AUZ] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • H1-hESC NGENCHMX3KP53Q • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq H1-hESC TF Show metadata Download track Track metadata identifier NGENCHMX3KP53Q data_source ENCODE Download track Download number_of_intervals 14,667 bp_covered 32,346,195 output_type IDR thresholded peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000ASY biological_replicate 2 technical_replicate 2_1, 2_2 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 233,325 downloaded_date 06/12/2022 release_date 03/20/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF970DXH.bed.gz processed_file_md5 d9ee70c882f5bca4438aaeef576e9de7 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF970DXH.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF970DXH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF970DXH/@@download/ENCFF970DXH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF970DXH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 0a13eb206505c2502d3233d903fd5e3f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32737473;External_resources=GEO:GSM1003524,UCSC-ENCODE-hg19:wgEncodeEH003082;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=embryonic cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.7.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASY] [Life stage: Embryonic] [TF ChIP-seq peaks]