EZH2 • OCI-LY1 NGENCNWZZ5ZEOV • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq OCI-LY1 TF Show metadata Download track Track metadata identifier NGENCNWZZ5ZEOV data_source ENCODE Download track Download number_of_intervals 15 bp_covered 6,060 output_type IDR thresholded peaks genome_build hg38 cell_type OCI-LY1 biosample_type Cell line biosample_term_id EFO:0005907 tissue_category Immune encode_experiment_id ENCSR520VTO biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 433 downloaded_date 06/12/2022 release_date 07/08/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF879YPI.bed.gz processed_file_md5 47df9f3585675e24276d88ce8a854021 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF879YPI.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF879YPI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF879YPI/@@download/ENCFF879YPI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF879YPI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 949be5e8079b3e017647edd3cb7c2bbe data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens OCI-LY1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=adult 44 years;Reference=NR;External_resources=GEO:GSE174874;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-19,2014-07-11;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=OCI-LY1;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=skeletal system,immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005907;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name ENCODE OCI-LY1 (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR520VTO] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • Fibroblast NGENCO4T4CJCDE • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Fibroblast TF Show metadata Download track Track metadata identifier NGENCO4T4CJCDE data_source ENCODE Download track Download number_of_intervals 13,327 bp_covered 13,294,509 output_type IDR thresholded peaks genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Skin encode_experiment_id ENCSR000ASE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 226,330 downloaded_date 06/12/2022 release_date 12/28/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF029VZK.bed.gz processed_file_md5 8d6814c662b5999dab58b30d0b3289ad wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF029VZK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF029VZK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF029VZK/@@download/ENCFF029VZK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF029VZK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4e308761975c5467baa343bdebc29d77 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens fibroblast of dermis;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002438,GEO:GSM1003550;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=fibroblast of dermis;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002551;is_hg38_lifted=no system_category Integumentary life_stage Unknown track_name ENCODE Fibroblast (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASE] [TF ChIP-seq peaks]
EZH2 • Epithelial cell NGENCOKKIHLWC3 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Epithelial cell TF Show metadata Download track Track metadata identifier NGENCOKKIHLWC3 data_source ENCODE Download track Download number_of_intervals 8,318 bp_covered 3,751,145 output_type IDR thresholded peaks genome_build hg38 cell_type Epithelial cell biosample_type Primary cell biosample_term_id CL:0000066 tissue_category Breast encode_experiment_id ENCSR000ARE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 150,504 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF224GAI.bed.gz processed_file_md5 9ddd9270405cfebe16afe224a76790bf wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF224GAI.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF224GAI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF224GAI/@@download/ENCFF224GAI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF224GAI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 31cc7a39a0a5916b588fe053ba712836 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens mammary epithelial cell female adult (50 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 50 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002412,GEO:GSM1003501;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=mammary epithelial cell;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=breast epithelial cell,mammary epithelial cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002327;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE Epithelial cell (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ARE] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • DND-41 NGENCPB4YRK476 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq DND-41 TF Show metadata Download track Track metadata identifier NGENCPB4YRK476 data_source ENCODE Download track Download number_of_intervals 2,967 bp_covered 1,463,777 output_type IDR thresholded peaks genome_build hg38 cell_type DND-41 biosample_type Cell line biosample_term_id EFO:0007074 tissue_category Blood encode_experiment_id ENCSR000ASW biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 52,768 downloaded_date 06/12/2022 release_date 12/12/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF187XWF.bed.gz processed_file_md5 b61ba8435c279153793ed0421926d519 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF187XWF.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF187XWF.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF187XWF/@@download/ENCFF187XWF.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF187XWF.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2dd247a6ab4342c695f8be9cc99929ad data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens DND-41;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 13 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003080,GEO:GSM1003522;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2012-03-06;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=DND-41;ENCODE_cell_slims=hematopoietic cell,T cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=ACC525;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0007074;is_hg38_lifted=no system_category Cardiovascular life_stage Child track_name ENCODE DND-41 (repl. 1, 2, 3) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASW] [Life stage: Child] [TF ChIP-seq peaks]
EZH2 • PC-9 NGENCPGZJTCV3U • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq PC-9 TF Show metadata Download track Track metadata identifier NGENCPGZJTCV3U data_source ENCODE Download track Download number_of_intervals 1,810 bp_covered 665,436 output_type conservative IDR thresholded peaks genome_build hg38 cell_type PC-9 biosample_type Cell line biosample_term_id EFO:0002847 tissue_category Lung encode_experiment_id ENCSR793USK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 33,122 downloaded_date 06/12/2022 release_date 07/13/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF784OPE.bed.gz processed_file_md5 c1949139f672fd089e90430fd13d0a50 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF784OPE.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF784OPE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF784OPE/@@download/ENCFF784OPE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF784OPE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 67242622a1d8446257484d548607d505 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens PC-9;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE123228;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-13,2016-05-06;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=PC-9;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002847;is_hg38_lifted=no system_category Respiratory life_stage Unknown track_name ENCODE PC-9 (repl. 1, 2) TF ChIP-seq EZH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR793USK] [TF ChIP-seq peaks]
EZH2 • Myotube NGENCQDQ6UGR5Q • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Myotube TF Show metadata Download track Track metadata identifier NGENCQDQ6UGR5Q data_source ENCODE Download track Download number_of_intervals 1,648 bp_covered 757,550 output_type IDR thresholded peaks genome_build hg38 cell_type Myotube biosample_type In vitro differentiated cells biosample_term_id CL:0002372 tissue_category Skeletal Muscle encode_experiment_id ENCSR000ASZ biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 30,323 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434ESB.bed.gz processed_file_md5 4088cf6bfb3589e47d50b7bf36da0252 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434ESB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434ESB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF434ESB/@@download/ENCFF434ESB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF434ESB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4c961f8c488587d0031653be3b826742 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens myotube originated from skeletal muscle myoblast;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 22 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003083,GEO:GSM1003523;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=myotube;ENCODE_cell_slims=NR;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=myotubule,single cell sarcomere;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002372;is_hg38_lifted=no system_category Muscular life_stage Adult track_name ENCODE Myotube (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASZ] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • Myoblast NGENCR3NRI2M3Z • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Myoblast TF Show metadata Download track Track metadata identifier NGENCR3NRI2M3Z data_source ENCODE Download track Download number_of_intervals 803 bp_covered 301,928 output_type IDR thresholded peaks genome_build hg38 cell_type Myoblast biosample_type Primary cell biosample_term_id CL:0000056 tissue_category Skeletal Muscle encode_experiment_id ENCSR000ARH biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 16,181 downloaded_date 06/12/2022 release_date 12/28/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF281ZTN.bed.gz processed_file_md5 52bcc6f97da62c2cf7f0a9455a332e34 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF281ZTN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF281ZTN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF281ZTN/@@download/ENCFF281ZTN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF281ZTN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 0478f3ccf8f7e06b418e1e3850cdccba data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens skeletal muscle myoblast male adult (22 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 22 years;Reference=PMID:32728046;External_resources=GEO:GSM1003484,UCSC-ENCODE-hg19:wgEncodeEH002415;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=skeletal muscle myoblast;ENCODE_cell_slims=embryonic cell,myoblast;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=skeletal myoblast;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000515;is_hg38_lifted=no system_category Muscular life_stage Adult track_name ENCODE Myoblast (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ARH] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • H1-hESC NGENCRCE3F7XQM • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq H1-hESC TF Show metadata Download track Track metadata identifier NGENCRCE3F7XQM data_source ENCODE Download track Download number_of_intervals 18,922 bp_covered 44,666,031 output_type IDR thresholded peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000ASY biological_replicate 1 technical_replicate 1_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 298,362 downloaded_date 06/12/2022 release_date 03/20/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF115HPT.bed.gz processed_file_md5 4e07275c4643a4da6e18ba0633eedd85 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF115HPT.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF115HPT.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF115HPT/@@download/ENCFF115HPT.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF115HPT.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 38b87890faa02c95cf4e7c829cfbd475 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32737473;External_resources=GEO:GSM1003524,UCSC-ENCODE-hg19:wgEncodeEH003082;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=embryonic cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.7.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASY] [Life stage: Embryonic] [TF ChIP-seq peaks]
EZH2 • B cell NGENCRFJIIEZES • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq B cell TF Show metadata Download track Track metadata identifier NGENCRFJIIEZES data_source ENCODE Download track Download number_of_intervals 1,619 bp_covered 679,437 output_type IDR thresholded peaks genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Immune encode_experiment_id ENCSR000AUZ biological_replicate 1 technical_replicate 1_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 28,401 downloaded_date 06/12/2022 release_date 01/05/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF290TWH.bed.gz processed_file_md5 a5db9278d76d813f81bcd091a9bede30 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF290TWH.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF290TWH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF290TWH/@@download/ENCFF290TWH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF290TWH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 9038eeacd6a7b6289ebd7ffea0d3805c data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens B cell female adult (27 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 27 years;Reference=NR;External_resources=GEO:GSM1003470,UCSC-ENCODE-hg19:wgEncodeEH003135;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=B cell;ENCODE_cell_slims=hematopoietic cell,B cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=B-cell,B-lymphocyte,B lymphocyte;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000236;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name ENCODE B cell (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000AUZ] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • DND-41 NGENCRI7M62DMW • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq DND-41 TF Show metadata Download track Track metadata identifier NGENCRI7M62DMW data_source ENCODE Download track Download number_of_intervals 958 bp_covered 248,758 output_type IDR thresholded peaks genome_build hg38 cell_type DND-41 biosample_type Cell line biosample_term_id EFO:0007074 tissue_category Blood encode_experiment_id ENCSR000ASW biological_replicate 1 technical_replicate 1_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 16,064 downloaded_date 06/12/2022 release_date 12/12/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF194GLR.bed.gz processed_file_md5 8b9a322372097eeb8c6fb4252e5f65bf wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF194GLR.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF194GLR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF194GLR/@@download/ENCFF194GLR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF194GLR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b7240a207156efaa3f80f216739caf31 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens DND-41;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 13 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003080,GEO:GSM1003522;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2012-03-06;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=DND-41;ENCODE_cell_slims=hematopoietic cell,T cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=ACC525;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0007074;is_hg38_lifted=no system_category Cardiovascular life_stage Child track_name ENCODE DND-41 (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASW] [Life stage: Child] [TF ChIP-seq peaks]
EZH2 • Neural progenitor cell NGENCSE3Z3FB2T • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Neural progenitor cell TF Show metadata Download track Track metadata identifier NGENCSE3Z3FB2T data_source ENCODE Download track Download number_of_intervals 15,675 bp_covered 36,657,346 output_type IDR thresholded peaks genome_build hg38 cell_type Neural progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0011020 tissue_category Brain encode_experiment_id ENCSR069DPL biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 256,430 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF077SBI.bed.gz processed_file_md5 b1b9a8a6902e286b8a58560fdc53f447 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF077SBI.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF077SBI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF077SBI/@@download/ENCFF077SBI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF077SBI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4f21134073e6807e3b4b8665a10d8778 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens neural progenitor cell originated from H9;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,SESCC,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=embryonic 5 days;Reference=NR;External_resources=GEO:GSE123199;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-16,2016-05-26;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=neural progenitor cell;ENCODE_cell_slims=progenitor cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0011020;is_hg38_lifted=no system_category Nervous life_stage Embryonic track_name ENCODE Neural progenitor cell (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR069DPL] [Life stage: Embryonic] [TF ChIP-seq peaks]
EZH2 • Neural cell NGENCSM6OXWYZM • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Neural cell TF Show metadata Download track Track metadata identifier NGENCSM6OXWYZM data_source ENCODE Download track Download number_of_intervals 3,299 bp_covered 1,285,503 output_type conservative IDR thresholded peaks genome_build hg38 cell_type Neural cell biosample_type In vitro differentiated cells biosample_term_id CL:0002319 tissue_category Brain encode_experiment_id ENCSR511CUH biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 58,956 downloaded_date 06/12/2022 release_date 12/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF912NTH.bed.gz processed_file_md5 f992c54457a856c39a8f7f2e47e821bf wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF912NTH.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF912NTH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF912NTH/@@download/ENCFF912NTH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF912NTH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ff5e2aa608420970fc00c23f400ad594 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens neural cell originated from H1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE174862;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2014-07-11,2016-10-25;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=neural cell;ENCODE_cell_slims=neural cell;ENCODE_system_slims=central nervous system,peripheral nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002319;is_hg38_lifted=no system_category Nervous life_stage Embryonic track_name ENCODE Neural cell (repl. 1, 2) TF ChIP-seq EZH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR511CUH] [Life stage: Embryonic] [TF ChIP-seq peaks]
EZH2 • H1-hESC NGENCSON6PFG7D • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq H1-hESC TF Show metadata Download track Track metadata identifier NGENCSON6PFG7D data_source ENCODE Download track Download number_of_intervals 18,680 bp_covered 74,549,966 output_type conservative IDR thresholded peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000ASY biological_replicate 1, 2 technical_replicate 1_1, 2_1, 2_2 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 288,359 downloaded_date 06/12/2022 release_date 03/20/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF154GLB.bed.gz processed_file_md5 d89109687402319416b956c300a55fe2 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF154GLB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF154GLB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF154GLB/@@download/ENCFF154GLB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF154GLB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7cae65455ef8514ea6fb22bb888cce3e data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32737473;External_resources=GEO:GSM1003524,UCSC-ENCODE-hg19:wgEncodeEH003082;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=embryonic cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.7.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1, 2) TF ChIP-seq EZH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASY] [Life stage: Embryonic] [TF ChIP-seq peaks]
EZH2 • Fibroblast NGENCT35NQXB7X • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Fibroblast TF Show metadata Download track Track metadata identifier NGENCT35NQXB7X data_source ENCODE Download track Download number_of_intervals 6,645 bp_covered 3,483,635 output_type IDR thresholded peaks genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Skin encode_experiment_id ENCSR000ASE biological_replicate 1 technical_replicate 1_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 114,843 downloaded_date 06/12/2022 release_date 12/28/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF761JWP.bed.gz processed_file_md5 9124a423ac1ee134dc7ecd91250c2070 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF761JWP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF761JWP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF761JWP/@@download/ENCFF761JWP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF761JWP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 9151ac44591f18f4a3ced07c9c44b5ef data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens fibroblast of dermis;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002438,GEO:GSM1003550;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=fibroblast of dermis;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002551;is_hg38_lifted=no system_category Integumentary life_stage Unknown track_name ENCODE Fibroblast (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASE] [TF ChIP-seq peaks]
EZH2 • HCT116 NGENCTIGHBS6LH • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HCT116 TF Show metadata Download track Track metadata identifier NGENCTIGHBS6LH data_source ENCODE Download track Download number_of_intervals 441 bp_covered 201,363 output_type IDR thresholded peaks genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR046HGP biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 8,408 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF761JMD.bed.gz processed_file_md5 fd46f7fb7efba4b5d35cc83b68544c36 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF761JMD.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF761JMD.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF761JMD/@@download/ENCFF761JMD.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF761JMD.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b8aabeae1067ff4f62c0f3ad8e7f06de data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HCT116;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE123197;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-18,2015-08-03;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HCT116;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=HCT116 cell,HCT-116 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name ENCODE HCT116 (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR046HGP] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • DND-41 NGENCTSSTFU3RY • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq DND-41 TF Show metadata Download track Track metadata identifier NGENCTSSTFU3RY data_source ENCODE Download track Download number_of_intervals 1,541 bp_covered 769,830 output_type IDR thresholded peaks genome_build hg38 cell_type DND-41 biosample_type Cell line biosample_term_id EFO:0007074 tissue_category Blood encode_experiment_id ENCSR000ASW biological_replicate 2, 3 technical_replicate 2_1, 3_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 28,313 downloaded_date 06/12/2022 release_date 12/12/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF953LPL.bed.gz processed_file_md5 d85d7b91876045b1f5e34ee721a69208 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF953LPL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF953LPL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF953LPL/@@download/ENCFF953LPL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF953LPL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c77bea3d0e39cd94fb2276dcd1e12dca data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens DND-41;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 13 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003080,GEO:GSM1003522;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2012-03-06;Submitted_track_name=rep2_vs_rep3.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=DND-41;ENCODE_cell_slims=hematopoietic cell,T cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=ACC525;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;Bio_rep=1, 2, 3;Tech_rep=1_1, 2_1, 3_1;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0007074;is_hg38_lifted=no system_category Cardiovascular life_stage Child track_name ENCODE DND-41 (repl. 2, 3) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASW] [Life stage: Child] [TF ChIP-seq peaks]
EZH2 • Myotube NGENCTVC6SNIQQ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Myotube TF Show metadata Download track Track metadata identifier NGENCTVC6SNIQQ data_source ENCODE Download track Download number_of_intervals 3,199 bp_covered 1,502,599 output_type conservative IDR thresholded peaks genome_build hg38 cell_type Myotube biosample_type In vitro differentiated cells biosample_term_id CL:0002372 tissue_category Skeletal Muscle encode_experiment_id ENCSR000ASZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 57,707 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF142DTU.bed.gz processed_file_md5 ab4a71e248cee4c16b899b0b58372054 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF142DTU.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF142DTU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF142DTU/@@download/ENCFF142DTU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF142DTU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 79cb8529582eb3eb9d8ec7a9d8014c67 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens myotube originated from skeletal muscle myoblast;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 22 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003083,GEO:GSM1003523;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=myotube;ENCODE_cell_slims=NR;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=myotubule,single cell sarcomere;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002372;is_hg38_lifted=no system_category Muscular life_stage Adult track_name ENCODE Myotube (repl. 1, 2) TF ChIP-seq EZH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASZ] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • HeLa-S3 NGENCUEXH2LASA • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HeLa-S3 TF Show metadata Download track Track metadata identifier NGENCUEXH2LASA data_source ENCODE Download track Download number_of_intervals 1,481 bp_covered 850,211 output_type IDR thresholded peaks genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000ATC biological_replicate 1 technical_replicate 1_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 26,675 downloaded_date 06/12/2022 release_date 01/02/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF613KCB.bed.gz processed_file_md5 88bc04fae694b7c5a3a8aa3c05dfc770 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF613KCB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF613KCB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF613KCB/@@download/ENCFF613KCB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF613KCB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 a6cb89eb76f6f57b0d4a7d97b880dab0 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HeLa-S3;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 31 years;Reference=PMID:32728046;External_resources=GEO:GSM1003520,UCSC-ENCODE-hg19:wgEncodeEH003086;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE HeLa-S3 (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ATC] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • K562 NGENCUIQPZ4U5E • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCUIQPZ4U5E data_source ENCODE Download track Download number_of_intervals 1,606 bp_covered 538,707 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000AQE biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 28,483 downloaded_date 06/12/2022 release_date 01/01/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF681ZHL.bed.gz processed_file_md5 097c09e9340c978499e5856391d742e0 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF681ZHL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF681ZHL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF681ZHL/@@download/ENCFF681ZHL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF681ZHL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 1b10a85c65a68128755c10cf03c2d136 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002089,GEO:GSM1003576;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000AQE] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • MM.1S NGENCUV7YLDGUD • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq MM.1S TF Show metadata Download track Track metadata identifier NGENCUV7YLDGUD data_source ENCODE Download track Download number_of_intervals 1,316 bp_covered 584,087 output_type optimal IDR thresholded peaks genome_build hg38 cell_type MM.1S biosample_type Cell line biosample_term_id EFO:0005724 tissue_category Blood encode_experiment_id ENCSR703KWN biological_replicate 1, 2 technical_replicate 1_1, 2_1,2_2 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 25,809 downloaded_date 06/04/2018 release_date 12/14/2017 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF138BXR.bed.gz processed_file_md5 b654c067f713329cfcd2f95c50c7eea6 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF138BXR.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF138BXR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF138BXR/@@download/ENCFF138BXR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF138BXR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 3f2bce212e84eea6010c7447be13f432 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq optimal IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens MM.1S;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 42 years;Reference=NR;External_resources=GEO:GSE169795;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-12-14,2015-08-03;Submitted_track_name=IDR_final_optimal.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=MM.1S;ENCODE_cell_slims=B cell,cancer cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=MM.1 S,MM.1S cell,MM.1-S;Analysis_title=ENCODE3 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005724;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE MM.1S (repl. 1, 2) TF ChIP-seq EZH2 optimal IDR thresholded peaks (narrowPeak) [Experiment: ENCSR703KWN] [Life stage: Adult] [TF ChIP-seq peaks]