EZH2 • HepG2 NGENCVDICBXUVT • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCVDICBXUVT data_source ENCODE Download track Download number_of_intervals 3,868 bp_covered 2,248,448 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000ARI biological_replicate 1 technical_replicate 1_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 68,118 downloaded_date 06/12/2022 release_date 12/12/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF758XFG.bed.gz processed_file_md5 df6f7c291580f11bc9356625ffbafea7 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF758XFG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF758XFG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF758XFG/@@download/ENCFF758XFG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF758XFG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7b49eeb24033a7388be9887dfa97b9bb data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728244;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002416,GEO:GSM1003487;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2017-02-06;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=endocrine system,digestive system,exocrine system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ARI] [Life stage: Child] [TF ChIP-seq peaks]
EZH2 • Neural cell NGENCVSGPSFSCR • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Neural cell TF Show metadata Download track Track metadata identifier NGENCVSGPSFSCR data_source ENCODE Download track Download number_of_intervals 3,894 bp_covered 1,520,280 output_type IDR thresholded peaks genome_build hg38 cell_type Neural cell biosample_type In vitro differentiated cells biosample_term_id CL:0002319 tissue_category Brain encode_experiment_id ENCSR511CUH biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 68,774 downloaded_date 06/12/2022 release_date 12/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF610EPB.bed.gz processed_file_md5 878b2771ff771177cd5f91f45d7e2b2a wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF610EPB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF610EPB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF610EPB/@@download/ENCFF610EPB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF610EPB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 0842bf5d3ce73db275cbd48f530c3ed2 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens neural cell originated from H1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE174862;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2014-07-11,2016-10-25;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=neural cell;ENCODE_cell_slims=neural cell;ENCODE_system_slims=central nervous system,peripheral nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002319;is_hg38_lifted=no system_category Nervous life_stage Embryonic track_name ENCODE Neural cell (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR511CUH] [Life stage: Embryonic] [TF ChIP-seq peaks]
EZH2 • HCT116 NGENCW2V45PC53 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HCT116 TF Show metadata Download track Track metadata identifier NGENCW2V45PC53 data_source ENCODE Download track Download number_of_intervals 286 bp_covered 128,014 output_type IDR thresholded peaks genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR046HGP biological_replicate 1 technical_replicate 1_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 5,519 downloaded_date 06/12/2022 release_date 02/04/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF717NAE.bed.gz processed_file_md5 8705483af2ac565c972d37be2deb7b22 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF717NAE.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF717NAE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF717NAE/@@download/ENCFF717NAE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF717NAE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 33bd90d65f681bcd097c12dbc1b8ee6a data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HCT116;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE123197;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-18,2015-08-03;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HCT116;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=HCT116 cell,HCT-116 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name ENCODE HCT116 (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR046HGP] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • Myotube NGENCWI3NLAQ7F • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Myotube TF Show metadata Download track Track metadata identifier NGENCWI3NLAQ7F data_source ENCODE Download track Download number_of_intervals 3,659 bp_covered 1,719,124 output_type IDR thresholded peaks genome_build hg38 cell_type Myotube biosample_type In vitro differentiated cells biosample_term_id CL:0002372 tissue_category Skeletal Muscle encode_experiment_id ENCSR000ASZ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 65,880 downloaded_date 06/12/2022 release_date 12/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF857GWB.bed.gz processed_file_md5 e700ee6b8a746ce975331896f2c6fd5e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF857GWB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF857GWB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF857GWB/@@download/ENCFF857GWB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF857GWB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cb1b305539dc37e21e4a2a371a67efb7 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens myotube originated from skeletal muscle myoblast;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 22 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003083,GEO:GSM1003523;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=myotube;ENCODE_cell_slims=NR;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=myotubule,single cell sarcomere;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002372;is_hg38_lifted=no system_category Muscular life_stage Adult track_name ENCODE Myotube (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASZ] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • B cell NGENCWJCWDCTHL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq B cell TF Show metadata Download track Track metadata identifier NGENCWJCWDCTHL data_source ENCODE Download track Download number_of_intervals 130 bp_covered 44,624 output_type IDR thresholded peaks genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Immune encode_experiment_id ENCSR000AUZ biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 2,411 downloaded_date 06/12/2022 release_date 01/05/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF516KFZ.bed.gz processed_file_md5 87e0d0a36f7fd039aabc682412129316 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF516KFZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF516KFZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF516KFZ/@@download/ENCFF516KFZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF516KFZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 005cf0125fc91ed9f8134b13124cf0bb data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens B cell female adult (27 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 27 years;Reference=NR;External_resources=GEO:GSM1003470,UCSC-ENCODE-hg19:wgEncodeEH003135;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=B cell;ENCODE_cell_slims=hematopoietic cell,B cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=B-cell,B-lymphocyte,B lymphocyte;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000236;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name ENCODE B cell (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000AUZ] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • K562 NGENCXKCEUVPXV • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCXKCEUVPXV data_source ENCODE Download track Download number_of_intervals 1,239 bp_covered 488,124 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000AQE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 24,691 downloaded_date 06/12/2022 release_date 01/01/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF900IHQ.bed.gz processed_file_md5 4f722e686f7dd3920a37ec0e510d6af4 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF900IHQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF900IHQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF900IHQ/@@download/ENCFF900IHQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF900IHQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 bd8951c4305f02a8abb63c461e81ad1f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002089,GEO:GSM1003576;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq EZH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000AQE] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • H1-hESC NGENCY2OKXCZZ3 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq H1-hESC TF Show metadata Download track Track metadata identifier NGENCY2OKXCZZ3 data_source ENCODE Download track Download number_of_intervals 18,857 bp_covered 74,728,714 output_type IDR thresholded peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR000ASY biological_replicate 1, 2 technical_replicate 1_1, 2_1, 2_2 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 290,637 downloaded_date 06/12/2022 release_date 03/20/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF232NZA.bed.gz processed_file_md5 856e090bdccc15f167ac04875ef88715 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF232NZA.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF232NZA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF232NZA/@@download/ENCFF232NZA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF232NZA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2866745de9b578998f041cf9ed94a2aa data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32737473;External_resources=GEO:GSM1003524,UCSC-ENCODE-hg19:wgEncodeEH003082;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=embryonic cell,stem cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.7.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ASY] [Life stage: Embryonic] [TF ChIP-seq peaks]
EZH2 • Neural progenitor cell NGENCYEW2CLJV5 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Neural progenitor cell TF Show metadata Download track Track metadata identifier NGENCYEW2CLJV5 data_source ENCODE Download track Download number_of_intervals 23,662 bp_covered 100,966,827 output_type conservative IDR thresholded peaks genome_build hg38 cell_type Neural progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0011020 tissue_category Brain encode_experiment_id ENCSR069DPL biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 396,219 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF465IJE.bed.gz processed_file_md5 b81a8284f6fcb0580dcf5a1d8e918ad3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF465IJE.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF465IJE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF465IJE/@@download/ENCFF465IJE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF465IJE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 928cb0e8337273d3af52256f53be4758 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens neural progenitor cell originated from H9;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,SESCC,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=embryonic 5 days;Reference=NR;External_resources=GEO:GSE123199;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-16,2016-05-26;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=neural progenitor cell;ENCODE_cell_slims=progenitor cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0011020;is_hg38_lifted=no system_category Nervous life_stage Embryonic track_name ENCODE Neural progenitor cell (repl. 1, 2) TF ChIP-seq EZH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR069DPL] [Life stage: Embryonic] [TF ChIP-seq peaks]
EZH2 • OCI-LY1 NGENCYNKBJDSZC • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq OCI-LY1 TF Show metadata Download track Track metadata identifier NGENCYNKBJDSZC data_source ENCODE Download track Download number_of_intervals 102 bp_covered 38,760 output_type IDR thresholded peaks genome_build hg38 cell_type OCI-LY1 biosample_type Cell line biosample_term_id EFO:0005907 tissue_category Immune encode_experiment_id ENCSR520VTO biological_replicate 1 technical_replicate 1_1, 1_2 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 2,122 downloaded_date 06/12/2022 release_date 07/08/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF095LUA.bed.gz processed_file_md5 2cf6976a340ee0f5f5b72c219a318db5 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF095LUA.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF095LUA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF095LUA/@@download/ENCFF095LUA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF095LUA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 1d6b8809b9b3f20b41130fe6f8400246 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens OCI-LY1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=adult 44 years;Reference=NR;External_resources=GEO:GSE174874;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-19,2014-07-11;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=OCI-LY1;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=skeletal system,immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005907;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name ENCODE OCI-LY1 (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR520VTO] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • HeLa-S3 NGENCYW65Y4MAM • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HeLa-S3 TF Show metadata Download track Track metadata identifier NGENCYW65Y4MAM data_source ENCODE Download track Download number_of_intervals 3,046 bp_covered 1,833,687 output_type IDR thresholded peaks genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000ATC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 58,969 downloaded_date 06/12/2022 release_date 01/02/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF318LHU.bed.gz processed_file_md5 36965407c34282a75003aa2d7f9b62e1 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF318LHU.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF318LHU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF318LHU/@@download/ENCFF318LHU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF318LHU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 16787adf93971dd45c15514c5f2d20ee data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HeLa-S3;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 31 years;Reference=PMID:32728046;External_resources=GEO:GSM1003520,UCSC-ENCODE-hg19:wgEncodeEH003086;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE HeLa-S3 (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ATC] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • HeLa-S3 NGENCZB5AJWRWP • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HeLa-S3 TF Show metadata Download track Track metadata identifier NGENCZB5AJWRWP data_source ENCODE Download track Download number_of_intervals 1,115 bp_covered 657,340 output_type IDR thresholded peaks genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000ATC biological_replicate 2 technical_replicate 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 19,973 downloaded_date 06/12/2022 release_date 01/02/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF966EZP.bed.gz processed_file_md5 3938dd3b943a283498eea38cd3756686 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF966EZP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF966EZP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF966EZP/@@download/ENCFF966EZP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF966EZP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 5a53e2701d552dad781134ba1c614640 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HeLa-S3;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 31 years;Reference=PMID:32728046;External_resources=GEO:GSM1003520,UCSC-ENCODE-hg19:wgEncodeEH003086;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-08-06,2011-02-10;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE HeLa-S3 (repl. 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000ATC] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • OCI-LY1 NGENCZEWC4KGVT • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq OCI-LY1 TF Show metadata Download track Track metadata identifier NGENCZEWC4KGVT data_source ENCODE Download track Download number_of_intervals 107 bp_covered 44,209 output_type conservative IDR thresholded peaks genome_build hg38 cell_type OCI-LY1 biosample_type Cell line biosample_term_id EFO:0005907 tissue_category Immune encode_experiment_id ENCSR520VTO biological_replicate 1, 2 technical_replicate 1_1, 1_2, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 2,366 downloaded_date 06/12/2022 release_date 07/08/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF849VFA.bed.gz processed_file_md5 34fe984da5e0f3b1c48dc0cf90f49d89 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF849VFA.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF849VFA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF849VFA/@@download/ENCFF849VFA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF849VFA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cc47d0f155bf9cd92372ec16605b92da data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens OCI-LY1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=adult 44 years;Reference=NR;External_resources=GEO:GSE174874;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-19,2014-07-11;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=OCI-LY1;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=skeletal system,immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005907;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name ENCODE OCI-LY1 (repl. 1, 2) TF ChIP-seq EZH2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR520VTO] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • PC-9 NGENCZGT7NRJCD • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq PC-9 TF Show metadata Download track Track metadata identifier NGENCZGT7NRJCD data_source ENCODE Download track Download number_of_intervals 775 bp_covered 288,590 output_type IDR thresholded peaks genome_build hg38 cell_type PC-9 biosample_type Cell line biosample_term_id EFO:0002847 tissue_category Lung encode_experiment_id ENCSR793USK biological_replicate 1 technical_replicate 1_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 14,320 downloaded_date 06/12/2022 release_date 07/13/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF252SMR.bed.gz processed_file_md5 89333fac051ee318118aca474bae1072 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF252SMR.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF252SMR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF252SMR/@@download/ENCFF252SMR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF252SMR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ed130595e9b2e88c0964c0feec9b0878 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens PC-9;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE123228;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-13,2016-05-06;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=PC-9;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002847;is_hg38_lifted=no system_category Respiratory life_stage Unknown track_name ENCODE PC-9 (repl. 1) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR793USK] [TF ChIP-seq peaks]
EZH2 • OCI-LY1 NGENCZP2WK2NRC • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq OCI-LY1 TF Show metadata Download track Track metadata identifier NGENCZP2WK2NRC data_source ENCODE Download track Download number_of_intervals 140 bp_covered 57,937 output_type IDR thresholded peaks genome_build hg38 cell_type OCI-LY1 biosample_type Cell line biosample_term_id EFO:0005907 tissue_category Immune encode_experiment_id ENCSR520VTO biological_replicate 1, 2 technical_replicate 1_1, 1_2, 2_1 antibody EZH2 assay TF ChIP-seq file_format bed narrowPeak file_size 3,050 downloaded_date 06/12/2022 release_date 07/08/2021 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF531KBP.bed.gz processed_file_md5 0b47313f3c87c1416fd6c75fde190eee wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF531KBP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF531KBP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF531KBP/@@download/ENCFF531KBP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF531KBP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 04de64e1877a986cec4f8f8881197cfa data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens OCI-LY1;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENCYCLOPEDIAv2,RegulomeDB_2_1;Life_stage_age=adult 44 years;Reference=NR;External_resources=GEO:GSE174874;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-11-19,2014-07-11;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=OCI-LY1;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=skeletal system,immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005907;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name ENCODE OCI-LY1 (repl. 1, 2) TF ChIP-seq EZH2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR520VTO] [Life stage: Adult] [TF ChIP-seq peaks]
EZH2 • Hepatocyte NGFTB6Q2RMOPZH • Factorbook34755879 Motif finding Hepatocyte TFBS Show metadata Download track Track metadata identifier NGFTB6Q2RMOPZH data_source Factorbook Download track Download number_of_intervals 11,706 bp_covered 163,884 output_type transcription factor binding sites all genome_build hg38 cell_type Hepatocyte biosample_type In vitro differentiated cells biosample_term_id CL:0000182 tissue_category Liver encode_experiment_id ENCSR384LYW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 91,121 downloaded_date 07/10/2024 release_date 11/23/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF245AUV_CKGCTTTTTGCCCC_sorted.bed.gz processed_file_md5 5eb4ec3f0f88ac15c8b413ab7c37e1c2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF245AUV_CKGCTTTTTGCCCC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF245AUV_CKGCTTTTTGCCCC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF245AUV_CKGCTTTTTGCCCC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF245AUV_CKGCTTTTTGCCCC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 6d2c48dd13e4cb9345d81c4068b4d95f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens hepatocyte originated from H9;Original_cell_type=hepatocyte;Lab=Bradley Bernstein, Broad;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF245AUV;ENCODE_bigBed_id=ENCFF552DZB;PMID=34755879;Motif_sequence=CKGCTTTTTGCCCC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=CL:0000182;is_hg38_lifted=no system_category Digestive life_stage Embryonic track_name Factorbook Hepatocyte (repl. 1, 2) Motif finding EZH2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR384LYW] [Life stage: Embryonic] [TFBS]
EZH2 • PC-3 NGFTBC6HNJELDV • Factorbook34755879 Motif finding PC-3 TFBS Show metadata Download track Track metadata identifier NGFTBC6HNJELDV data_source Factorbook Download track Download number_of_intervals 720 bp_covered 20,160 output_type transcription factor binding sites all genome_build hg38 cell_type PC-3 biosample_type Cell line biosample_term_id EFO:0002074 tissue_category Male Reproductive encode_experiment_id ENCSR218QFN biological_replicate 1 technical_replicate 1_1, 1_2 antibody EZH2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 15,326 downloaded_date 07/10/2024 release_date 12/14/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF080GLG_HWRAWTKHVDNAKTTYTAADAKNHAAAD_sorted.bed.gz processed_file_md5 147c8dbce400ba800b69d926a33eb701 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF080GLG_HWRAWTKHVDNAKTTYTAADAKNHAAAD_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF080GLG_HWRAWTKHVDNAKTTYTAADAKNHAAAD_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF080GLG_HWRAWTKHVDNAKTTYTAADAKNHAAAD.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF080GLG_HWRAWTKHVDNAKTTYTAADAKNHAAAD.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 587840d950711cbdfbb62919ccb7ade0 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens PC-3;Original_cell_type=PC-3;Lab=Bradley Bernstein, Broad;System=reproductive system;ENCODE_BED_id=ENCFF080GLG;ENCODE_bigBed_id=ENCFF855OUB;PMID=34755879;Motif_sequence=HWRAWTKHVDNAKTTYTAADAKNHAAAD;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002074;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook PC-3 (repl. 1) Motif finding EZH2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR218QFN] [Life stage: Adult] [TFBS]
EZH2 • GM12878 NGFTBN2E2ITE4G • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBN2E2ITE4G data_source Factorbook Download track Download number_of_intervals 1,004 bp_covered 11,044 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000ARD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 13,792 downloaded_date 07/10/2024 release_date 03/06/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF339YTO_RGAGGVAGRGR_sorted.bed.gz processed_file_md5 ebfb4fbe96f87119c0d246193ea0f9c8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF339YTO_RGAGGVAGRGR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF339YTO_RGAGGVAGRGR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF339YTO_RGAGGVAGRGR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF339YTO_RGAGGVAGRGR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c160f5969a544a506fad5fe591e36be5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Bradley Bernstein, Broad;System=immune system;ENCODE_BED_id=ENCFF339YTO;ENCODE_bigBed_id=ENCFF635TDF;PMID=34755879;Motif_sequence=RGAGGVAGRGR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding EZH2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000ARD] [TFBS]
EZH2 • HepG2 NGFTBP66S5CHWH • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBP66S5CHWH data_source Factorbook Download track Download number_of_intervals 3,701 bp_covered 40,711 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000ARI biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 33,176 downloaded_date 07/10/2024 release_date 03/06/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF109JCT_TGTSTGTGTKT_sorted.bed.gz processed_file_md5 77325e6c6d4a4ba85a616732613b1947 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF109JCT_TGTSTGTGTKT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF109JCT_TGTSTGTGTKT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF109JCT_TGTSTGTGTKT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF109JCT_TGTSTGTGTKT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 ebb06ab16a7ae20322810730ddc7d12b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Bradley Bernstein, Broad;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF109JCT;ENCODE_bigBed_id=ENCFF509MLV;PMID=34755879;Motif_sequence=TGTSTGTGTKT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding EZH2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000ARI] [Life stage: Child] [TFBS]
EZH2 • Fibroblast NGFTBPEQXM355W • Factorbook34755879 Motif finding Fibroblast TFBS Show metadata Download track Track metadata identifier NGFTBPEQXM355W data_source Factorbook Download track Download number_of_intervals 13,975 bp_covered 209,625 output_type transcription factor binding sites all genome_build hg38 cell_type Fibroblast biosample_type Primary cell biosample_term_id CL:0000057 tissue_category Lung encode_experiment_id ENCSR000ARO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 162,212 downloaded_date 07/10/2024 release_date 03/06/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF078YQZ_GTGTGYGYGYGTGTG_sorted.bed.gz processed_file_md5 f8345f44fc737005cf33302c898d48ba wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF078YQZ_GTGTGYGYGYGTGTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF078YQZ_GTGTGYGYGYGTGTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF078YQZ_GTGTGYGYGYGTGTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF078YQZ_GTGTGYGYGYGTGTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8110c1cdf9ca260411b637e4987b3090 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens fibroblast of lung female child (11 years) and male adult (45 years);Original_cell_type=fibroblast of lung;Lab=Bradley Bernstein, Broad;System=respiratory system;ENCODE_BED_id=ENCFF078YQZ;ENCODE_bigBed_id=ENCFF479BAW;PMID=34755879;Motif_sequence=GTGTGYGYGYGTGTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=CL:0002553;is_hg38_lifted=no system_category Respiratory life_stage Unknown track_name Factorbook Fibroblast (repl. 1, 2) Motif finding EZH2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000ARO] [TFBS]
EZH2 • GM12878 NGFTBQ5C3QKTRY • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBQ5C3QKTRY data_source Factorbook Download track Download number_of_intervals 389 bp_covered 3,112 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000ARD biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody EZH2 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 4,637 downloaded_date 07/10/2024 release_date 03/06/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF339YTO_TGTGGTTT_sorted.bed.gz processed_file_md5 8f00b349cd71d5dad7f7d66f52e0e1f6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF339YTO_TGTGGTTT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF339YTO_TGTGGTTT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF339YTO_TGTGGTTT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF339YTO_TGTGGTTT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 56faafe162ae7543e6eade3d3651a084 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Bradley Bernstein, Broad;System=immune system;ENCODE_BED_id=ENCFF339YTO;ENCODE_bigBed_id=ENCFF635TDF;PMID=34755879;Motif_sequence=TGTGGTTT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding EZH2 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000ARD] [TFBS]