FOS • MCF 10A NGFTB2HBP7GECF • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTB2HBP7GECF data_source Factorbook Download track Download number_of_intervals 3,580 bp_covered 107,400 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 89,112 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF630TLS_GGHRRGTAGTGTAKACAGCRTGGATACRCT_sorted.bed.gz processed_file_md5 75e42c8d642e3d6fb0e63791db47348a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF630TLS_GGHRRGTAGTGTAKACAGCRTGGATACRCT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF630TLS_GGHRRGTAGTGTAKACAGCRTGGATACRCT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF630TLS_GGHRRGTAGTGTAKACAGCRTGGATACRCT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF630TLS_GGHRRGTAGTGTAKACAGCRTGGATACRCT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 748ed17a1b5b61f895cb9f8717e1d061 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 0.01% ethanol for 36 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF630TLS;ENCODE_bigBed_id=ENCFF299XJQ;PMID=34755879;Motif_sequence=GGHRRGTAGTGTAKACAGCRTGGATACRCT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOT] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTB3EWL3HACV • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTB3EWL3HACV data_source Factorbook Download track Download number_of_intervals 9,046 bp_covered 135,690 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DON biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 153,918 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_RGKSTCACVNCCTGG_sorted.bed.gz processed_file_md5 f7983fc4ffcd713068141556aa92f4b4 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_RGKSTCACVNCCTGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_RGKSTCACVNCCTGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF091XPV_RGKSTCACVNCCTGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF091XPV_RGKSTCACVNCCTGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 719b0788d6c49aaf4b04e9afd851ed7e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A treated with 1 _M afimoxifene for 36 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF091XPV;ENCODE_bigBed_id=ENCFF348TQD;PMID=34755879;Motif_sequence=RGKSTCACVNCCTGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DON] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTB4HV2HVRB2 • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTB4HV2HVRB2 data_source Factorbook Download track Download number_of_intervals 87,933 bp_covered 1,846,593 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,674,485 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF630TLS_DNDNDVRVDGATGAGTCAYHV_sorted.bed.gz processed_file_md5 c3f980cbc500085a3e221c70e5e002e8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF630TLS_DNDNDVRVDGATGAGTCAYHV_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF630TLS_DNDNDVRVDGATGAGTCAYHV_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF630TLS_DNDNDVRVDGATGAGTCAYHV.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF630TLS_DNDNDVRVDGATGAGTCAYHV.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 940d6fab1dd8aa9d9755924c6ad76d1f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 0.01% ethanol for 36 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF630TLS;ENCODE_bigBed_id=ENCFF299XJQ;PMID=34755879;Motif_sequence=DNDNDVRVDGATGAGTCAYHV;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOT] [Life stage: Adult] [TFBS]
FOS • Endothelial cell NGFTB4QOXYDXJP • Factorbook34755879 Motif finding Endothelial cell TFBS Show metadata Download track Track metadata identifier NGFTB4QOXYDXJP data_source Factorbook Download track Download number_of_intervals 44,818 bp_covered 358,544 output_type transcription factor binding sites all genome_build hg38 cell_type Endothelial cell biosample_type Primary cell biosample_term_id CL:0000115 tissue_category Umbilical Cord encode_experiment_id ENCSR000EVU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 416,080 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF972ZIV_RTGACTCA_sorted.bed.gz processed_file_md5 8ddd4507acd492c4d4c5eb578991a9c9 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF972ZIV_RTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF972ZIV_RTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF972ZIV_RTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF972ZIV_RTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2e884ff82a6388d0bff39172d26937d2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Original_cell_type=endothelial cell of umbilical vein;Lab=Peggy Farnham, USC;System=reproductive system,circulatory system;ENCODE_BED_id=ENCFF972ZIV;ENCODE_bigBed_id=ENCFF415XBG;PMID=34755879;Motif_sequence=RTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=CL:0002618;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook Endothelial cell (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EVU] [TFBS]
FOS • MCF 10A NGFTB5TOSJGZNE • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTB5TOSJGZNE data_source Factorbook Download track Download number_of_intervals 170 bp_covered 3,400 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 2,430 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF289MZF_GAGATTTCATCATRCTWCYC_filtered.bed.gz processed_file_md5 6dfce96e8396d7d5bf4fc24d6f14ceae wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF289MZF_GAGATTTCATCATRCTWCYC_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF289MZF_GAGATTTCATCATRCTWCYC_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF289MZF_GAGATTTCATCATRCTWCYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF289MZF_GAGATTTCATCATRCTWCYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d0f4bc9758ef1cfe5a27a998e5a9d7a9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 1 _M afimoxifene for 4 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF289MZF;ENCODE_bigBed_id=ENCFF361PLR;PMID=34755879;Motif_sequence=GAGATTTCATCATRCTWCYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOO] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTB742S2BCZW • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTB742S2BCZW data_source Factorbook Download track Download number_of_intervals 83,870 bp_covered 670,960 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 849,447 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF289MZF_TGAVTCAT_sorted.bed.gz processed_file_md5 c4cda9f11061ebb9bc0978adfbb5fa70 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF289MZF_TGAVTCAT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF289MZF_TGAVTCAT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF289MZF_TGAVTCAT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF289MZF_TGAVTCAT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d6e218e9340325db1993c299fffabc58 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 1 _M afimoxifene for 4 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF289MZF;ENCODE_bigBed_id=ENCFF361PLR;PMID=34755879;Motif_sequence=TGAVTCAT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOO] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBBU4K7BZ5H • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBBU4K7BZ5H data_source Factorbook Download track Download number_of_intervals 250 bp_covered 6,500 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 4,990 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF159SAG_CTTTGTCYAGYGTATCCATGCTGYRK_filtered.bed.gz processed_file_md5 2acad49089a6f5e910314e788fb33283 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF159SAG_CTTTGTCYAGYGTATCCATGCTGYRK_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF159SAG_CTTTGTCYAGYGTATCCATGCTGYRK_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF159SAG_CTTTGTCYAGYGTATCCATGCTGYRK.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF159SAG_CTTTGTCYAGYGTATCCATGCTGYRK.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1d152ae06cc61a6694afa563287c0628 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 1 _M afimoxifene for 12 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF159SAG;ENCODE_bigBed_id=ENCFF124AQH;PMID=34755879;Motif_sequence=CTTTGTCYAGYGTATCCATGCTGYRK;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOP] [Life stage: Adult] [TFBS]
FOS • GM12878 NGFTBD3Z7IDNAT • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBD3Z7IDNAT data_source Factorbook Download track Download number_of_intervals 789 bp_covered 8,679 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000EYZ biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 10,963 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_GGTCACGTGAC_sorted.bed.gz processed_file_md5 228a1205f7ce7426f58d4c23218d28d3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_GGTCACGTGAC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_GGTCACGTGAC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF571DGT_GGTCACGTGAC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF571DGT_GGTCACGTGAC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 594f187624bcea62164ac2a80f6ed657 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Sherman Weissman, Yale;System=immune system;ENCODE_BED_id=ENCFF571DGT;ENCODE_bigBed_id=ENCFF157FTE;PMID=34755879;Motif_sequence=GGTCACGTGAC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2, 3) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EYZ] [TFBS]
FOS • MCF-7 NGFTBERKKUDGAU • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBERKKUDGAU data_source Factorbook Download track Download number_of_intervals 87,509 bp_covered 1,312,635 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR569XNP biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,407,174 downloaded_date 07/10/2024 release_date 12/19/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF519VZH_VDGGATGASTCAYHD_sorted.bed.gz processed_file_md5 fa4973e0846af48a9871176a55767f2b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF519VZH_VDGGATGASTCAYHD_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF519VZH_VDGGATGASTCAYHD_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF519VZH_VDGGATGASTCAYHD.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF519VZH_VDGGATGASTCAYHD.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4c1ce26bee0563477e73c63969bc298e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF519VZH;ENCODE_bigBed_id=ENCFF282FWZ;PMID=34755879;Motif_sequence=VDGGATGASTCAYHD;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 3) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR569XNP] [Life stage: Adult] [TFBS]
FOS • GM12878 NGFTBFUWZ2BWVH • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBFUWZ2BWVH data_source Factorbook Download track Download number_of_intervals 2,375 bp_covered 26,125 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000EYZ biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 33,211 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_YSATTGGYYRV_sorted.bed.gz processed_file_md5 47b82d6407caf08e7799add099a3f399 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_YSATTGGYYRV_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_YSATTGGYYRV_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF571DGT_YSATTGGYYRV.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF571DGT_YSATTGGYYRV.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 dc5931d304a3ce95f73fd5c466b07aee data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Sherman Weissman, Yale;System=immune system;ENCODE_BED_id=ENCFF571DGT;ENCODE_bigBed_id=ENCFF157FTE;PMID=34755879;Motif_sequence=YSATTGGYYRV;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2, 3) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EYZ] [TFBS]
FOS • MCF 10A NGFTBG7LS5CEK2 • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBG7LS5CEK2 data_source Factorbook Download track Download number_of_intervals 157 bp_covered 4,553 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DON biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 3,416 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF091XPV_GTMYRCAGYRTGGATRHRCTARACAAAGG_filtered.bed.gz processed_file_md5 39f182487324cf8836a6ec4f9fb12da0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF091XPV_GTMYRCAGYRTGGATRHRCTARACAAAGG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF091XPV_GTMYRCAGYRTGGATRHRCTARACAAAGG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF091XPV_GTMYRCAGYRTGGATRHRCTARACAAAGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF091XPV_GTMYRCAGYRTGGATRHRCTARACAAAGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 041de382a701d19d6447cc647edb544e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A treated with 1 _M afimoxifene for 36 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF091XPV;ENCODE_bigBed_id=ENCFF348TQD;PMID=34755879;Motif_sequence=GTMYRCAGYRTGGATRHRCTARACAAAGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000DON] [Life stage: Adult] [TFBS]
FOS • Endothelial cell NGFTBH6BV54WO3 • Factorbook34755879 Motif finding Endothelial cell TFBS Show metadata Download track Track metadata identifier NGFTBH6BV54WO3 data_source Factorbook Download track Download number_of_intervals 16,759 bp_covered 134,072 output_type transcription factor binding sites all genome_build hg38 cell_type Endothelial cell biosample_type Primary cell biosample_term_id CL:0000115 tissue_category Umbilical Cord encode_experiment_id ENCSR000EVU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 168,989 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF972ZIV_TTCCTBTB_sorted.bed.gz processed_file_md5 6006af2eb7234545afeffc753b28dd6a wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF972ZIV_TTCCTBTB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF972ZIV_TTCCTBTB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF972ZIV_TTCCTBTB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF972ZIV_TTCCTBTB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 691aacdcaafca2ce29c3ced2dabe17c7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Original_cell_type=endothelial cell of umbilical vein;Lab=Peggy Farnham, USC;System=reproductive system,circulatory system;ENCODE_BED_id=ENCFF972ZIV;ENCODE_bigBed_id=ENCFF415XBG;PMID=34755879;Motif_sequence=TTCCTBTB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=CL:0002618;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook Endothelial cell (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EVU] [TFBS]
FOS • Endothelial cell NGFTBH7BN56KDG • Factorbook34755879 Motif finding Endothelial cell TFBS Show metadata Download track Track metadata identifier NGFTBH7BN56KDG data_source Factorbook Download track Download number_of_intervals 52,237 bp_covered 783,555 output_type transcription factor binding sites all genome_build hg38 cell_type Endothelial cell biosample_type Primary cell biosample_term_id CL:0000115 tissue_category Umbilical Cord encode_experiment_id ENCSR000EVU biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 831,194 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF972ZIV_RRRTGASTCABHGBB_sorted.bed.gz processed_file_md5 404fff075f0287929f50ea56239b56bd wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF972ZIV_RRRTGASTCABHGBB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF972ZIV_RRRTGASTCABHGBB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF972ZIV_RRRTGASTCABHGBB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF972ZIV_RRRTGASTCABHGBB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9f4b4505190a510218f5c3a8ff6ca36d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Original_cell_type=endothelial cell of umbilical vein;Lab=Peggy Farnham, USC;System=reproductive system,circulatory system;ENCODE_BED_id=ENCFF972ZIV;ENCODE_bigBed_id=ENCFF415XBG;PMID=34755879;Motif_sequence=RRRTGASTCABHGBB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=CL:0002618;is_hg38_lifted=no system_category Embryo life_stage Unknown track_name Factorbook Endothelial cell (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EVU] [TFBS]
FOS • HeLa-S3 NGFTBIJ5RMO5P3 • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBIJ5RMO5P3 data_source Factorbook Download track Download number_of_intervals 1,754 bp_covered 36,834 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EZE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 36,978 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_BHRRCCAATSRGARSVSRSNR_sorted.bed.gz processed_file_md5 44eb5eb3b9ce8801aec7becbc946fa27 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_BHRRCCAATSRGARSVSRSNR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_BHRRCCAATSRGARSVSRSNR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF494YNM_BHRRCCAATSRGARSVSRSNR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF494YNM_BHRRCCAATSRGARSVSRSNR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 3a7422dc3bc3c4bbbcede87573d7cbdd data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Sherman Weissman, Yale;System=reproductive system;ENCODE_BED_id=ENCFF494YNM;ENCODE_bigBed_id=ENCFF829XRF;PMID=34755879;Motif_sequence=BHRRCCAATSRGARSVSRSNR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EZE] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBJCME3AH5K • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBJCME3AH5K data_source Factorbook Download track Download number_of_intervals 98,500 bp_covered 1,083,500 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,383,954 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_MTGAGTCAYYN_sorted.bed.gz processed_file_md5 6caa696cfb7728c769b1a49c37aaf756 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_MTGAGTCAYYN_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_MTGAGTCAYYN_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF159SAG_MTGAGTCAYYN.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF159SAG_MTGAGTCAYYN.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2abfb737f4793738d6bfe98cbbd9bb24 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 1 _M afimoxifene for 12 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF159SAG;ENCODE_bigBed_id=ENCFF124AQH;PMID=34755879;Motif_sequence=MTGAGTCAYYN;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOP] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBJISDJMGKH • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBJISDJMGKH data_source Factorbook Download track Download number_of_intervals 4,115 bp_covered 119,335 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DON biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 100,307 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_GTMYRCAGYRTGGATRHRCTARACAAAGG_sorted.bed.gz processed_file_md5 a1c94792bfe2416ef064e4d7e10d0b12 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_GTMYRCAGYRTGGATRHRCTARACAAAGG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_GTMYRCAGYRTGGATRHRCTARACAAAGG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF091XPV_GTMYRCAGYRTGGATRHRCTARACAAAGG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF091XPV_GTMYRCAGYRTGGATRHRCTARACAAAGG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 041de382a701d19d6447cc647edb544e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A treated with 1 _M afimoxifene for 36 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF091XPV;ENCODE_bigBed_id=ENCFF348TQD;PMID=34755879;Motif_sequence=GTMYRCAGYRTGGATRHRCTARACAAAGG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DON] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBJTERSURS2 • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBJTERSURS2 data_source Factorbook Download track Download number_of_intervals 66,585 bp_covered 865,605 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DON biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,048,569 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_NNNRTGAGTCAYH_sorted.bed.gz processed_file_md5 6991fbc8d6f3399c5178a7a06edcf6ae wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_NNNRTGAGTCAYH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_NNNRTGAGTCAYH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF091XPV_NNNRTGAGTCAYH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF091XPV_NNNRTGAGTCAYH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 878d706da79b068a784f7749a6b0c0b0 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A treated with 1 _M afimoxifene for 36 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF091XPV;ENCODE_bigBed_id=ENCFF348TQD;PMID=34755879;Motif_sequence=NNNRTGAGTCAYH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DON] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBKCIUAQASV • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBKCIUAQASV data_source Factorbook Download track Download number_of_intervals 147 bp_covered 4,410 output_type transcription factor binding sites significant genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 3,458 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF630TLS_GGHRRGTAGTGTAKACAGCRTGGATACRCT_filtered.bed.gz processed_file_md5 87293ac3a71b2647db61894baf2ca260 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF630TLS_GGHRRGTAGTGTAKACAGCRTGGATACRCT_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF630TLS_GGHRRGTAGTGTAKACAGCRTGGATACRCT_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF630TLS_GGHRRGTAGTGTAKACAGCRTGGATACRCT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF630TLS_GGHRRGTAGTGTAKACAGCRTGGATACRCT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 748ed17a1b5b61f895cb9f8717e1d061 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 0.01% ethanol for 36 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF630TLS;ENCODE_bigBed_id=ENCFF299XJQ;PMID=34755879;Motif_sequence=GGHRRGTAGTGTAKACAGCRTGGATACRCT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOT] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBKX44KPOPM • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBKX44KPOPM data_source Factorbook Download track Download number_of_intervals 93,516 bp_covered 1,402,740 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 1,624,584 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF289MZF_VRDRATGASTCABWD_sorted.bed.gz processed_file_md5 22519de2ebecc74ae357349538ac1be8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF289MZF_VRDRATGASTCABWD_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF289MZF_VRDRATGASTCABWD_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF289MZF_VRDRATGASTCABWD.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF289MZF_VRDRATGASTCABWD.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8e050313a35f1090edd36d3d64a7860d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 1 _M afimoxifene for 4 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF289MZF;ENCODE_bigBed_id=ENCFF361PLR;PMID=34755879;Motif_sequence=VRDRATGASTCABWD;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOO] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBLN4UBN63C • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBLN4UBN63C data_source Factorbook Download track Download number_of_intervals 70,206 bp_covered 561,648 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 714,896 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF630TLS_ATGACTCA_sorted.bed.gz processed_file_md5 48e7751be4897956be9392864bc573ea wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF630TLS_ATGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF630TLS_ATGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF630TLS_ATGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF630TLS_ATGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 823ec4de2c935580fca03a4ced62c59f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 0.01% ethanol for 36 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF630TLS;ENCODE_bigBed_id=ENCFF299XJQ;PMID=34755879;Motif_sequence=ATGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOT] [Life stage: Adult] [TFBS]