FOS • K562 NGFTBLRBXWEDYY • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBLRBXWEDYY data_source Factorbook Download track Download number_of_intervals 1,054 bp_covered 10,540 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000FAI biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 14,603 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF258PLH_TGABDGACRG_sorted.bed.gz processed_file_md5 f18f5e99b3fb03fd9b4e3e4143d3ccf1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF258PLH_TGABDGACRG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF258PLH_TGABDGACRG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF258PLH_TGABDGACRG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF258PLH_TGABDGACRG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 54c115e34fc1e3578233e86203d00896 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Sherman Weissman, Yale;System=immune system;ENCODE_BED_id=ENCFF258PLH;ENCODE_bigBed_id=ENCFF951GBI;PMID=34755879;Motif_sequence=TGABDGACRG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2, 3) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000FAI] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBMUXGYYIMN • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBMUXGYYIMN data_source Factorbook Download track Download number_of_intervals 4,890 bp_covered 127,140 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 112,936 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_CTTTGTCYAGYGTATCCATGCTGYRK_sorted.bed.gz processed_file_md5 38c4c7dc3e72a05332cf67470a8779b3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_CTTTGTCYAGYGTATCCATGCTGYRK_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_CTTTGTCYAGYGTATCCATGCTGYRK_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF159SAG_CTTTGTCYAGYGTATCCATGCTGYRK.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF159SAG_CTTTGTCYAGYGTATCCATGCTGYRK.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 1d152ae06cc61a6694afa563287c0628 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 1 _M afimoxifene for 12 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF159SAG;ENCODE_bigBed_id=ENCFF124AQH;PMID=34755879;Motif_sequence=CTTTGTCYAGYGTATCCATGCTGYRK;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOP] [Life stage: Adult] [TFBS]
FOS • HeLa-S3 NGFTBNHEZE6NAR • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBNHEZE6NAR data_source Factorbook Download track Download number_of_intervals 15,140 bp_covered 196,820 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EZE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 200,872 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_SHVTGASTCATCH_sorted.bed.gz processed_file_md5 490c5cc7ead5227f5d005e758dc98a30 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_SHVTGASTCATCH_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_SHVTGASTCATCH_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF494YNM_SHVTGASTCATCH.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF494YNM_SHVTGASTCATCH.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d69f3c028e4d47c40fec4ed6e67fcca7 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Sherman Weissman, Yale;System=reproductive system;ENCODE_BED_id=ENCFF494YNM;ENCODE_bigBed_id=ENCFF829XRF;PMID=34755879;Motif_sequence=SHVTGASTCATCH;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EZE] [Life stage: Adult] [TFBS]
FOS • IMR-90 NGFTBOE73ZMPHZ • Factorbook34755879 Motif finding IMR-90 TFBS Show metadata Download track Track metadata identifier NGFTBOE73ZMPHZ data_source Factorbook Download track Download number_of_intervals 2,759 bp_covered 41,385 output_type transcription factor binding sites all genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR124AIG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 47,371 downloaded_date 07/10/2024 release_date 12/19/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF459DPT_CGCRTCACGTGACSG_sorted.bed.gz processed_file_md5 5e17599e890e0597dce8fc50fd504c09 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF459DPT_CGCRTCACGTGACSG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF459DPT_CGCRTCACGTGACSG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF459DPT_CGCRTCACGTGACSG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF459DPT_CGCRTCACGTGACSG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 906b380c91373468a862d9d40694b673 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens IMR-90;Original_cell_type=IMR-90;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF459DPT;ENCODE_bigBed_id=ENCFF179EDA;PMID=34755879;Motif_sequence=CGCRTCACGTGACSG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no system_category Respiratory life_stage Embryonic track_name Factorbook IMR-90 (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR124AIG] [Life stage: Embryonic] [TFBS]
FOS • GM12878 NGFTBOVC4H62XM • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBOVC4H62XM data_source Factorbook Download track Download number_of_intervals 425 bp_covered 4,675 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000EYZ biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 6,800 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_KTGABTGACAG_sorted.bed.gz processed_file_md5 f6809af67091a30890168f132101130f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_KTGABTGACAG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_KTGABTGACAG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF571DGT_KTGABTGACAG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF571DGT_KTGABTGACAG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0de5906a920d5d04d75b54f465fa9c0e data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Sherman Weissman, Yale;System=immune system;ENCODE_BED_id=ENCFF571DGT;ENCODE_bigBed_id=ENCFF157FTE;PMID=34755879;Motif_sequence=KTGABTGACAG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2, 3) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EYZ] [TFBS]
FOS • GM12878 NGFTBPR3NEPFGT • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBPR3NEPFGT data_source Factorbook Download track Download number_of_intervals 2,832 bp_covered 42,480 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000EYZ biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 49,132 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_BYRRCCAATSRGARS_sorted.bed.gz processed_file_md5 1466cf057ce26ff79ac8f084a6a21e1b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_BYRRCCAATSRGARS_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF571DGT_BYRRCCAATSRGARS_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF571DGT_BYRRCCAATSRGARS.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF571DGT_BYRRCCAATSRGARS.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 468f392504b8cd7dfded973bc2e950ca data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Sherman Weissman, Yale;System=immune system;ENCODE_BED_id=ENCFF571DGT;ENCODE_bigBed_id=ENCFF157FTE;PMID=34755879;Motif_sequence=BYRRCCAATSRGARS;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2, 3) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EYZ] [TFBS]
FOS • HeLa-S3 NGFTBQ66F3LUGC • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBQ66F3LUGC data_source Factorbook Download track Download number_of_intervals 894 bp_covered 18,774 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EZE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 18,738 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_TGGHYMDHNNGVCTGYCMRTC_sorted.bed.gz processed_file_md5 2a921a317d2bebefd944ff59bda64732 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_TGGHYMDHNNGVCTGYCMRTC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_TGGHYMDHNNGVCTGYCMRTC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF494YNM_TGGHYMDHNNGVCTGYCMRTC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF494YNM_TGGHYMDHNNGVCTGYCMRTC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4b30b2c4cd45c18e4c6be5d46926d7c0 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Sherman Weissman, Yale;System=reproductive system;ENCODE_BED_id=ENCFF494YNM;ENCODE_bigBed_id=ENCFF829XRF;PMID=34755879;Motif_sequence=TGGHYMDHNNGVCTGYCMRTC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EZE] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBQZERQJMRD • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBQZERQJMRD data_source Factorbook Download track Download number_of_intervals 22,021 bp_covered 176,168 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 218,013 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_CAGTCATC_sorted.bed.gz processed_file_md5 3fb242efd64e85372037cd3fcff55a80 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_CAGTCATC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_CAGTCATC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF159SAG_CAGTCATC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF159SAG_CAGTCATC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 eb124f9f1bad046547e7bcd62b4af489 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 1 _M afimoxifene for 12 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF159SAG;ENCODE_bigBed_id=ENCFF124AQH;PMID=34755879;Motif_sequence=CAGTCATC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOP] [Life stage: Adult] [TFBS]
FOS • IMR-90 NGFTBRTWJVHZDM • Factorbook34755879 Motif finding IMR-90 TFBS Show metadata Download track Track metadata identifier NGFTBRTWJVHZDM data_source Factorbook Download track Download number_of_intervals 34,463 bp_covered 275,704 output_type transcription factor binding sites all genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR124AIG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 316,506 downloaded_date 07/10/2024 release_date 12/19/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF459DPT_VTGACTCA_sorted.bed.gz processed_file_md5 03f8dbb3c3b927394821bf505c1d4cff wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF459DPT_VTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF459DPT_VTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF459DPT_VTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF459DPT_VTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 b0683921bf3a78ff8791b3faebb46099 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens IMR-90;Original_cell_type=IMR-90;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF459DPT;ENCODE_bigBed_id=ENCFF179EDA;PMID=34755879;Motif_sequence=VTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no system_category Respiratory life_stage Embryonic track_name Factorbook IMR-90 (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR124AIG] [Life stage: Embryonic] [TFBS]
FOS • IMR-90 NGFTBSLRRO55A5 • Factorbook34755879 Motif finding IMR-90 TFBS Show metadata Download track Track metadata identifier NGFTBSLRRO55A5 data_source Factorbook Download track Download number_of_intervals 47,597 bp_covered 713,955 output_type transcription factor binding sites all genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR124AIG biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 756,429 downloaded_date 07/10/2024 release_date 12/19/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF459DPT_RDGGRTGASTCAYHR_sorted.bed.gz processed_file_md5 b46ac8f67b6f6a96b8d11d1e767ec0d5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF459DPT_RDGGRTGASTCAYHR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF459DPT_RDGGRTGASTCAYHR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF459DPT_RDGGRTGASTCAYHR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF459DPT_RDGGRTGASTCAYHR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 40255366ba24be829a014cf607601749 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens IMR-90;Original_cell_type=IMR-90;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF459DPT;ENCODE_bigBed_id=ENCFF179EDA;PMID=34755879;Motif_sequence=RDGGRTGASTCAYHR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no system_category Respiratory life_stage Embryonic track_name Factorbook IMR-90 (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR124AIG] [Life stage: Embryonic] [TFBS]
FOS • K562 NGFTBU43CHT4M7 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBU43CHT4M7 data_source Factorbook Download track Download number_of_intervals 5,193 bp_covered 57,123 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000FAI biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 70,094 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF258PLH_YSATTGGYYRV_sorted.bed.gz processed_file_md5 0e6fb5935757755b48261ff6d9bfd542 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF258PLH_YSATTGGYYRV_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF258PLH_YSATTGGYYRV_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF258PLH_YSATTGGYYRV.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF258PLH_YSATTGGYYRV.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 07afbc63e5d59e3a81857907e933074c data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Sherman Weissman, Yale;System=immune system;ENCODE_BED_id=ENCFF258PLH;ENCODE_bigBed_id=ENCFF951GBI;PMID=34755879;Motif_sequence=YSATTGGYYRV;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2, 3) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000FAI] [Life stage: Adult] [TFBS]
FOS • K562 NGFTBUWHUBK4OC • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBUWHUBK4OC data_source Factorbook Download track Download number_of_intervals 6,297 bp_covered 88,158 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000FAI biological_replicate 1, 2, 3 technical_replicate 1_1, 2_1, 3_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 100,957 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF258PLH_BYRRCCAATSRGAR_sorted.bed.gz processed_file_md5 56e1299c212a25ae9356cbae6540bbd1 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF258PLH_BYRRCCAATSRGAR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF258PLH_BYRRCCAATSRGAR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF258PLH_BYRRCCAATSRGAR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF258PLH_BYRRCCAATSRGAR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7a84f205c0d4b17cb640c0ebd3199eec data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Sherman Weissman, Yale;System=immune system;ENCODE_BED_id=ENCFF258PLH;ENCODE_bigBed_id=ENCFF951GBI;PMID=34755879;Motif_sequence=BYRRCCAATSRGAR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2, 3) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000FAI] [Life stage: Adult] [TFBS]
FOS • MCF-7 NGFTBVMUZLJRM7 • Factorbook34755879 Motif finding MCF-7 TFBS Show metadata Download track Track metadata identifier NGFTBVMUZLJRM7 data_source Factorbook Download track Download number_of_intervals 81,025 bp_covered 648,200 output_type transcription factor binding sites all genome_build hg38 cell_type MCF-7 biosample_type Cell line biosample_term_id EFO:0001203 tissue_category Breast encode_experiment_id ENCSR569XNP biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 782,249 downloaded_date 07/10/2024 release_date 12/19/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF519VZH_TGAGTCAY_sorted.bed.gz processed_file_md5 259207f9cfc059de41d434fcb3ef861b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF519VZH_TGAGTCAY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF519VZH_TGAGTCAY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF519VZH_TGAGTCAY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF519VZH_TGAGTCAY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0f2eaed4b6454ac4b7057166ca38e515 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF-7;Original_cell_type=MCF-7;Lab=Michael Snyder, Stanford;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF519VZH;ENCODE_bigBed_id=ENCFF282FWZ;PMID=34755879;Motif_sequence=TGAGTCAY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF-7 (repl. 1, 3) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR569XNP] [Life stage: Adult] [TFBS]
FOS • HeLa-S3 NGFTBWSOKEDIJ4 • Factorbook34755879 Motif finding HeLa-S3 TFBS Show metadata Download track Track metadata identifier NGFTBWSOKEDIJ4 data_source Factorbook Download track Download number_of_intervals 14,084 bp_covered 112,672 output_type transcription factor binding sites all genome_build hg38 cell_type HeLa-S3 biosample_type Cell line biosample_term_id EFO:0002791 tissue_category Female Reproductive encode_experiment_id ENCSR000EZE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 125,969 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_RTGACTCA_sorted.bed.gz processed_file_md5 7248e6cf7804535bb139cf2110846932 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_RTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF494YNM_RTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF494YNM_RTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF494YNM_RTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 db71c7711a54c990a68029d6ea04efc2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HeLa-S3;Original_cell_type=HeLa-S3;Lab=Sherman Weissman, Yale;System=reproductive system;ENCODE_BED_id=ENCFF494YNM;ENCODE_bigBed_id=ENCFF829XRF;PMID=34755879;Motif_sequence=RTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook HeLa-S3 (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EZE] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBYLTKUFKUI • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBYLTKUFKUI data_source Factorbook Download track Download number_of_intervals 73,131 bp_covered 585,048 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DON biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 743,295 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_TGAGTCAT_sorted.bed.gz processed_file_md5 f3350cf603347599142f70a4ddfe24b0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_TGAGTCAT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF091XPV_TGAGTCAT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF091XPV_TGAGTCAT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF091XPV_TGAGTCAT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d68e9c03135df8343200fef6482857bc data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A treated with 1 _M afimoxifene for 36 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF091XPV;ENCODE_bigBed_id=ENCFF348TQD;PMID=34755879;Motif_sequence=TGAGTCAT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DON] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBYPCKQSXT3 • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBYPCKQSXT3 data_source Factorbook Download track Download number_of_intervals 5,915 bp_covered 118,300 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 118,235 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF289MZF_GAGATTTCATCATRCTWCYC_sorted.bed.gz processed_file_md5 a145f79427360ea32aad877cb4333190 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF289MZF_GAGATTTCATCATRCTWCYC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF289MZF_GAGATTTCATCATRCTWCYC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF289MZF_GAGATTTCATCATRCTWCYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF289MZF_GAGATTTCATCATRCTWCYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d0f4bc9758ef1cfe5a27a998e5a9d7a9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 1 _M afimoxifene for 4 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF289MZF;ENCODE_bigBed_id=ENCFF361PLR;PMID=34755879;Motif_sequence=GAGATTTCATCATRCTWCYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOO] [Life stage: Adult] [TFBS]
FOS • MCF 10A NGFTBZ7Y4VL23V • Factorbook34755879 Motif finding MCF 10A TFBS Show metadata Download track Track metadata identifier NGFTBZ7Y4VL23V data_source Factorbook Download track Download number_of_intervals 88,308 bp_covered 706,464 output_type transcription factor binding sites all genome_build hg38 cell_type MCF 10A biosample_type Cell line biosample_term_id EFO:0001200 tissue_category Breast encode_experiment_id ENCSR000DOP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOS assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 881,567 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_ATGASTCA_sorted.bed.gz processed_file_md5 16ac59b25c89f7b203577269607982d8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_ATGASTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF159SAG_ATGASTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF159SAG_ATGASTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF159SAG_ATGASTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9a57a6a72933fa4aa3a9bc020e1ee7ca data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens MCF 10A stably expressing SRC treated with 1 _M afimoxifene for 12 hours;Original_cell_type=MCF 10A;Lab=Kevin Struhl, HMS;System=exocrine system,integumental system;ENCODE_BED_id=ENCFF159SAG;ENCODE_bigBed_id=ENCFF124AQH;PMID=34755879;Motif_sequence=ATGASTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001200;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name Factorbook MCF 10A (repl. 1, 2) Motif finding FOS transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DOP] [Life stage: Adult] [TFBS]
FOSB • A549 NGENC3H4NDIENL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENC3H4NDIENL data_source ENCODE Download track Download number_of_intervals 3,574 bp_covered 1,130,089 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR918GHT biological_replicate 2 technical_replicate 2_1 antibody FOSB assay TF ChIP-seq file_format bed narrowPeak file_size 70,466 downloaded_date 06/12/2022 release_date 06/30/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF995IMQ.bed.gz processed_file_md5 517736df9e27d3fda06d2400185011d2 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF995IMQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF995IMQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF995IMQ/@@download/ENCFF995IMQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF995IMQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4ce490ce14887230c0fca0c23ff7996f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 genetically modified (insertion) using CRISPR targeting H. sapiens FOSB;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE170613;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-07-01,2020-06-30;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.5.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 2) TF ChIP-seq FOSB IDR thresholded peaks (narrowPeak) [Experiment: ENCSR918GHT] [Life stage: Adult] [TF ChIP-seq peaks]
FOSB • A549 NGENCMUDXGDZMG • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCMUDXGDZMG data_source ENCODE Download track Download number_of_intervals 6,066 bp_covered 2,065,290 output_type conservative IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR918GHT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOSB assay TF ChIP-seq file_format bed narrowPeak file_size 119,882 downloaded_date 06/12/2022 release_date 06/30/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF050TJU.bed.gz processed_file_md5 681ddb8352bcb84aede1686a5e4e82f2 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF050TJU.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF050TJU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF050TJU/@@download/ENCFF050TJU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF050TJU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 a7fb9726fd3703fd0f447a38303229c5 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 genetically modified (insertion) using CRISPR targeting H. sapiens FOSB;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE170613;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-07-01,2020-06-30;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.5.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 2) TF ChIP-seq FOSB conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR918GHT] [Life stage: Adult] [TF ChIP-seq peaks]
FOSB • A549 NGENCNG6P7NFKJ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCNG6P7NFKJ data_source ENCODE Download track Download number_of_intervals 3,791 bp_covered 1,199,510 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR918GHT biological_replicate 1 technical_replicate 1_1 antibody FOSB assay TF ChIP-seq file_format bed narrowPeak file_size 75,080 downloaded_date 06/12/2022 release_date 06/30/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF241NDA.bed.gz processed_file_md5 7d789daf108e25d00dd5efa5d6f68f3b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF241NDA.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF241NDA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF241NDA/@@download/ENCFF241NDA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF241NDA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 029f4547ba77396df9b806e154a4c49f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 genetically modified (insertion) using CRISPR targeting H. sapiens FOSB;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE170613;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-07-01,2020-06-30;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.5.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1) TF ChIP-seq FOSB IDR thresholded peaks (narrowPeak) [Experiment: ENCSR918GHT] [Life stage: Adult] [TF ChIP-seq peaks]