FOXO4 • K562 NGENCRZZM7ZBKL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCRZZM7ZBKL data_source ENCODE Download track Download number_of_intervals 2,171 bp_covered 601,606 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR426PTT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOXO4 assay TF ChIP-seq file_format bed narrowPeak file_size 43,856 downloaded_date 06/12/2022 release_date 07/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF037TSW.bed.gz processed_file_md5 af87d2a85affa2cb5f110595644212a9 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF037TSW.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF037TSW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF037TSW/@@download/ENCFF037TSW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF037TSW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c5fc3877a47b97ef89039600e1ee8572 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens FOXO4;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE175247;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-03,2022-01-20,2020-06-30;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq FOXO4 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR426PTT] [Life stage: Adult] [TF ChIP-seq peaks]
FOXO4 • HepG2 NGENCYBJAEN35N • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCYBJAEN35N data_source ENCODE Download track Download number_of_intervals 1,071 bp_covered 480,880 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR329RRQ biological_replicate 2 technical_replicate 2_1 antibody FOXO4 assay TF ChIP-seq file_format bed narrowPeak file_size 21,731 downloaded_date 07/10/2025 release_date 01/30/2023 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF451XMY.bed.gz processed_file_md5 c89d86c864a92d52da6abf5f5fc36458 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF451XMY.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF451XMY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF451XMY/@@download/ENCFF451XMY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF451XMY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 df97f24120609867bf5232397041a8c2 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens FOXO4;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE231001;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2023-01-31,2020-06-26;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,digestive system,endocrine system;ENCODE_biosample_term_synonyms=HepG2 cell,Hep-G2;Analysis_title=ENCODE4 v1.8.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 2) TF ChIP-seq FOXO4 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR329RRQ] [Life stage: Child] [TF ChIP-seq peaks]
FOXO4 • K562 NGENCYHCYIUM57 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCYHCYIUM57 data_source ENCODE Download track Download number_of_intervals 1,277 bp_covered 322,176 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR426PTT biological_replicate 2 technical_replicate 2_1 antibody FOXO4 assay TF ChIP-seq file_format bed narrowPeak file_size 25,704 downloaded_date 06/12/2022 release_date 07/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF531NJV.bed.gz processed_file_md5 12ca5c4ef26a5f03de0e4f1148c42e13 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF531NJV.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF531NJV.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF531NJV/@@download/ENCFF531NJV.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF531NJV.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 3e89c02482608e7e3679167f00f4d89f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens FOXO4;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE175247;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-03,2022-01-20,2020-06-30;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq FOXO4 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR426PTT] [Life stage: Adult] [TF ChIP-seq peaks]
FOXP1 • HepG2 NGENC2VBFYEWAK • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENC2VBFYEWAK data_source ENCODE Download track Download number_of_intervals 3,658 bp_covered 1,133,911 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR029LBT biological_replicate 4 technical_replicate 4_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 65,824 downloaded_date 06/12/2022 release_date 12/09/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF721LUS.bed.gz processed_file_md5 0f3f534b2573148490b4a3d443664ad8 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF721LUS.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF721LUS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF721LUS/@@download/ENCFF721LUS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF721LUS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f3c870577c055c59ce9ee8143a9a65d9 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE105268;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-01-27,2014-07-07;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 4) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR029LBT] [Life stage: Child] [TF ChIP-seq peaks]
FOXP1 • HepG2 NGENC6L6UW6NE5 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENC6L6UW6NE5 data_source ENCODE Download track Download number_of_intervals 7,666 bp_covered 2,408,716 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR029LBT biological_replicate 3, 4 technical_replicate 3_1, 4_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 141,071 downloaded_date 06/12/2022 release_date 12/09/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF717IHQ.bed.gz processed_file_md5 0e4f21862f8f657e0cae27e3e75c8a03 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF717IHQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF717IHQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF717IHQ/@@download/ENCFF717IHQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF717IHQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ae5ae730259f50924c365ddd1dcd17ab data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE105268;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-01-27,2014-07-07;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 3, 4) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR029LBT] [Life stage: Child] [TF ChIP-seq peaks]
FOXP1 • WTC11 NGENC6VZ7SVDKH • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq WTC11 TF Show metadata Download track Track metadata identifier NGENC6VZ7SVDKH data_source ENCODE Download track Download number_of_intervals 18,631 bp_covered 9,664,338 output_type IDR thresholded peaks genome_build hg38 cell_type WTC11 biosample_type Cell line biosample_term_id EFO:0009747 tissue_category Skin encode_experiment_id ENCSR546PDE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 346,350 downloaded_date 05/15/2024 release_date 07/23/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF338WGC.bed.gz processed_file_md5 4916b975dd17845294eacd80f0ecd769 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF338WGC.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF338WGC.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF338WGC/@@download/ENCFF338WGC.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF338WGC.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 485108af65c3b2cb988111b7d6048790 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens WTC11 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE230899;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-08-15,2022-07-25;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=WTC11;ENCODE_cell_slims=fibroblast,stem cell,induced pluripotent stem cell,connective tissue cell;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=WTC11,WTC-11;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0009747;is_hg38_lifted=no system_category Integumentary life_stage Adult track_name ENCODE WTC11 (repl. 1, 2) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR546PDE] [Life stage: Adult] [TF ChIP-seq peaks]
FOXP1 • WTC11 NGENC7GIPUGESN • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq WTC11 TF Show metadata Download track Track metadata identifier NGENC7GIPUGESN data_source ENCODE Download track Download number_of_intervals 15,979 bp_covered 8,395,659 output_type IDR thresholded peaks genome_build hg38 cell_type WTC11 biosample_type Cell line biosample_term_id EFO:0009747 tissue_category Skin encode_experiment_id ENCSR546PDE biological_replicate 2 technical_replicate 2_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 272,593 downloaded_date 05/15/2024 release_date 07/23/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF459OMX.bed.gz processed_file_md5 eef4f87b7d5fc3e8bee0b72bf1f9e0c1 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF459OMX.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF459OMX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF459OMX/@@download/ENCFF459OMX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF459OMX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 430167140a313b41c7aeb20143e1370c data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens WTC11 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE230899;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-08-15,2022-07-25;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=WTC11;ENCODE_cell_slims=fibroblast,stem cell,induced pluripotent stem cell,connective tissue cell;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=WTC11,WTC-11;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0009747;is_hg38_lifted=no system_category Integumentary life_stage Adult track_name ENCODE WTC11 (repl. 2) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR546PDE] [Life stage: Adult] [TF ChIP-seq peaks]
FOXP1 • HepG2 NGENCEJVEZVEMQ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCEJVEZVEMQ data_source ENCODE Download track Download number_of_intervals 5,223 bp_covered 1,618,587 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR029LBT biological_replicate 3 technical_replicate 3_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 89,754 downloaded_date 06/12/2022 release_date 12/09/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF361TOE.bed.gz processed_file_md5 7fd74440f470957f3379a6ec70317e07 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF361TOE.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF361TOE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF361TOE/@@download/ENCFF361TOE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF361TOE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2f6b4e0a992d0c3272c48cbb26ffc4bc data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE105268;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-01-27,2014-07-07;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 3) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR029LBT] [Life stage: Child] [TF ChIP-seq peaks]
FOXP1 • WTC11 NGENCEQUCHXPGU • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq WTC11 TF Show metadata Download track Track metadata identifier NGENCEQUCHXPGU data_source ENCODE Download track Download number_of_intervals 6,129 bp_covered 2,589,672 output_type IDR thresholded peaks genome_build hg38 cell_type WTC11 biosample_type Cell line biosample_term_id EFO:0009747 tissue_category Skin encode_experiment_id ENCSR546PDE biological_replicate 1 technical_replicate 1_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 120,656 downloaded_date 05/15/2024 release_date 07/23/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF796ITH.bed.gz processed_file_md5 b1ffa194936763d2bebc5d13ab5ff256 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF796ITH.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF796ITH.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF796ITH/@@download/ENCFF796ITH.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF796ITH.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2026da5aae04f7c629869dbf8a8c7bbb data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens WTC11 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE230899;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-08-15,2022-07-25;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=WTC11;ENCODE_cell_slims=fibroblast,stem cell,induced pluripotent stem cell,connective tissue cell;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=WTC11,WTC-11;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0009747;is_hg38_lifted=no system_category Integumentary life_stage Adult track_name ENCODE WTC11 (repl. 1) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR546PDE] [Life stage: Adult] [TF ChIP-seq peaks]
FOXP1 • HepG2 NGENCFSAPI6376 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCFSAPI6376 data_source ENCODE Download track Download number_of_intervals 24,480 bp_covered 7,533,869 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR369YUK biological_replicate 2 technical_replicate 2_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 409,162 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF185UNG.bed.gz processed_file_md5 e696e2b9b9b3a1891a7aff6d1d24fa20 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF185UNG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF185UNG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF185UNG/@@download/ENCFF185UNG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF185UNG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 469f3c2321d598256d76b9a901a2f044 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728244;External_resources=GEO:GSE127609;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2018-02-10,2016-10-11;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 2) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR369YUK] [Life stage: Child] [TF ChIP-seq peaks]
FOXP1 • WTC11 NGENCH7ZOXFWJS • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq WTC11 TF Show metadata Download track Track metadata identifier NGENCH7ZOXFWJS data_source ENCODE Download track Download number_of_intervals 12,580 bp_covered 6,493,247 output_type conservative IDR thresholded peaks genome_build hg38 cell_type WTC11 biosample_type Cell line biosample_term_id EFO:0009747 tissue_category Skin encode_experiment_id ENCSR546PDE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 230,311 downloaded_date 05/15/2024 release_date 07/23/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF050IDZ.bed.gz processed_file_md5 a707a08e5fee8e79f0fbe9102cffb950 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF050IDZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF050IDZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF050IDZ/@@download/ENCFF050IDZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF050IDZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 83759c9e63848ee97a65941563db584a data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens WTC11 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 30 years;Reference=NR;External_resources=GEO:GSE230899;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-08-15,2022-07-25;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=WTC11;ENCODE_cell_slims=fibroblast,stem cell,induced pluripotent stem cell,connective tissue cell;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=WTC11,WTC-11;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0009747;is_hg38_lifted=no system_category Integumentary life_stage Adult track_name ENCODE WTC11 (repl. 1, 2) TF ChIP-seq FOXP1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR546PDE] [Life stage: Adult] [TF ChIP-seq peaks]
FOXP1 • K562 NGENCJ6KJEXJTU • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCJ6KJEXJTU data_source ENCODE Download track Download number_of_intervals 8,290 bp_covered 4,103,682 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR530WIV biological_replicate 2 technical_replicate 2_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 160,596 downloaded_date 06/12/2022 release_date 01/07/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF516RJO.bed.gz processed_file_md5 13ef9ebe5b4305d678a49246b408a297 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF516RJO.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF516RJO.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF516RJO/@@download/ENCFF516RJO.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF516RJO.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 826bdf1f2327deeacf5462f965de4dd8 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE208917;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-01-13,2022-01-04;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR530WIV] [Life stage: Adult] [TF ChIP-seq peaks]
FOXP1 • HepG2 NGENCO5CZ7RZ43 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCO5CZ7RZ43 data_source ENCODE Download track Download number_of_intervals 25,417 bp_covered 7,567,620 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR369YUK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 435,008 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF918VOE.bed.gz processed_file_md5 a6c48cf5c0c532f9cac7fb71b903873a wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF918VOE.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF918VOE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF918VOE/@@download/ENCFF918VOE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF918VOE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 fa7a8900250680dacc1eb9c735730168 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728244;External_resources=GEO:GSE127609;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2018-02-10,2016-10-11;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq FOXP1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR369YUK] [Life stage: Child] [TF ChIP-seq peaks]
FOXP1 • K562 NGENCPF3IQQ2KE • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCPF3IQQ2KE data_source ENCODE Download track Download number_of_intervals 11,700 bp_covered 6,019,564 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR530WIV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 227,814 downloaded_date 06/12/2022 release_date 01/07/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF493RYY.bed.gz processed_file_md5 2992c6e0b5e90d7b13ebd8e30d58f6c2 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF493RYY.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF493RYY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF493RYY/@@download/ENCFF493RYY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF493RYY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 0ababf4d8eb02e37211fe70457301254 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE208917;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-01-13,2022-01-04;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq FOXP1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR530WIV] [Life stage: Adult] [TF ChIP-seq peaks]
FOXP1 • HepG2 NGENCQJXX4STCX • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCQJXX4STCX data_source ENCODE Download track Download number_of_intervals 14,508 bp_covered 4,344,173 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR369YUK biological_replicate 1 technical_replicate 1_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 238,742 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF316ZCZ.bed.gz processed_file_md5 8cd1a50dd1019d5f054ecb197106a818 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF316ZCZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF316ZCZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF316ZCZ/@@download/ENCFF316ZCZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF316ZCZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 7d795ace6f1bb42469ab6816d7699d5d data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728244;External_resources=GEO:GSE127609;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2018-02-10,2016-10-11;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR369YUK] [Life stage: Child] [TF ChIP-seq peaks]
FOXP1 • K562 NGENCTXM52GTUO • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCTXM52GTUO data_source ENCODE Download track Download number_of_intervals 12,557 bp_covered 6,461,776 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR530WIV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 244,257 downloaded_date 06/12/2022 release_date 01/07/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF954SDY.bed.gz processed_file_md5 e3880ecdd66ed0821dab4101c8dba181 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF954SDY.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF954SDY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF954SDY/@@download/ENCFF954SDY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF954SDY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 dae50607dc8e3dedd786f1f11c5f947f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE208917;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-01-13,2022-01-04;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR530WIV] [Life stage: Adult] [TF ChIP-seq peaks]
FOXP1 • HepG2 NGENCVPMHYM4UQ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCVPMHYM4UQ data_source ENCODE Download track Download number_of_intervals 28,993 bp_covered 8,776,852 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR369YUK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 490,993 downloaded_date 06/12/2022 release_date 12/04/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF823ERM.bed.gz processed_file_md5 ef83422164e6ab63cf759218f2be8dff wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF823ERM.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF823ERM.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF823ERM/@@download/ENCFF823ERM.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF823ERM.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 70d3dbc75fc2675bb979ff94ceb46c26 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728244;External_resources=GEO:GSE127609;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2018-02-10,2016-10-11;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR369YUK] [Life stage: Child] [TF ChIP-seq peaks]
FOXP1 • HepG2 NGENCWX3EJBYFT • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCWX3EJBYFT data_source ENCODE Download track Download number_of_intervals 7,211 bp_covered 2,254,308 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR029LBT biological_replicate 3, 4 technical_replicate 3_1, 4_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 132,922 downloaded_date 06/12/2022 release_date 12/09/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF629QYI.bed.gz processed_file_md5 46c31970fed4eff83fd26a93c48dc121 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF629QYI.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF629QYI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF629QYI/@@download/ENCFF629QYI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF629QYI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 60d6fe8e03e80cee6a31a114b906db35 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE105268;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-01-27,2014-07-07;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 3, 4) TF ChIP-seq FOXP1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR029LBT] [Life stage: Child] [TF ChIP-seq peaks]
FOXP1 • K562 NGENCZX4NZDJQB • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCZX4NZDJQB data_source ENCODE Download track Download number_of_intervals 5,680 bp_covered 2,770,923 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR530WIV biological_replicate 1 technical_replicate 1_1 antibody FOXP1 assay TF ChIP-seq file_format bed narrowPeak file_size 107,548 downloaded_date 06/12/2022 release_date 01/07/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF376IPZ.bed.gz processed_file_md5 5749b8e845cffb3f818ea04a68175f57 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF376IPZ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF376IPZ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF376IPZ/@@download/ENCFF376IPZ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF376IPZ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c7829587ed1d58de3a60faa94ac1667b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE208917;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-01-13,2022-01-04;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq FOXP1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR530WIV] [Life stage: Adult] [TF ChIP-seq peaks]
FOXP1 • HepG2 NGFTB3VRHRDCMZ • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTB3VRHRDCMZ data_source Factorbook Download track Download number_of_intervals 6,183 bp_covered 49,464 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR369YUK biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody FOXP1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 62,812 downloaded_date 07/10/2024 release_date 02/10/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF862ZEX_BTYTGTKT_sorted.bed.gz processed_file_md5 176f22b0f9c32f8fe48762658f479ef5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF862ZEX_BTYTGTKT_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF862ZEX_BTYTGTKT_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF862ZEX_BTYTGTKT.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF862ZEX_BTYTGTKT.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 fffb50d7884945e4d891033d78984f94 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens FOXP1;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF862ZEX;ENCODE_bigBed_id=ENCFF823ERM;PMID=34755879;Motif_sequence=BTYTGTKT;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding FOXP1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR369YUK] [Life stage: Child] [TFBS]