GLYR1 • HepG2 NGENCZU2XHRHPV • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCZU2XHRHPV data_source ENCODE Download track Download number_of_intervals 14,919 bp_covered 6,713,883 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR159RBE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GLYR1 assay TF ChIP-seq file_format bed narrowPeak file_size 290,979 downloaded_date 06/12/2022 release_date 02/07/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF647XGR.bed.gz processed_file_md5 5cc947f38e0704087b29afd87b3b63ed wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF647XGR.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF647XGR.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF647XGR/@@download/ENCFF647XGR.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF647XGR.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 73517685f3c44d6ea55efe29b90404d6 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens GLYR1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE209084;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2022-03-28,2020-08-14;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.9.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq GLYR1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR159RBE] [Life stage: Child] [TF ChIP-seq peaks]
GMEB1 • K562 NGENC4TWIBOBPT • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC4TWIBOBPT data_source ENCODE Download track Download number_of_intervals 18,779 bp_covered 9,369,203 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR928KOR biological_replicate 1 technical_replicate 1_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 365,303 downloaded_date 06/12/2022 release_date 12/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF525VAD.bed.gz processed_file_md5 26ceb283ffa3cb90a5531eac41e79a2d wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF525VAD.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF525VAD.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF525VAD/@@download/ENCFF525VAD.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF525VAD.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b10324091c09fa8c352d4dcf41b4d9fb data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE127637,FactorBook:ENCSR928KOR;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2018-01-26,2016-09-20;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq GMEB1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR928KOR] [Life stage: Adult] [TF ChIP-seq peaks]
GMEB1 • K562 NGENC5EJA7UPWF • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC5EJA7UPWF data_source ENCODE Download track Download number_of_intervals 27,728 bp_covered 15,401,939 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR928KOR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 544,041 downloaded_date 06/12/2022 release_date 12/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF258BNK.bed.gz processed_file_md5 831a7ef7fd683421367633a34f1d2482 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF258BNK.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF258BNK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF258BNK/@@download/ENCFF258BNK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF258BNK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 04dc21919f369118d266bb5a03e3bb2b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE127637,FactorBook:ENCSR928KOR;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2018-01-26,2016-09-20;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq GMEB1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR928KOR] [Life stage: Adult] [TF ChIP-seq peaks]
GMEB1 • HepG2 NGENC6ZASFTS2Q • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENC6ZASFTS2Q data_source ENCODE Download track Download number_of_intervals 23,321 bp_covered 14,726,228 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR780OXL biological_replicate 2 technical_replicate 2_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 449,494 downloaded_date 06/12/2022 release_date 08/22/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF368XDU.bed.gz processed_file_md5 681437584496921f14e665d7330feef7 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF368XDU.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF368XDU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF368XDU/@@download/ENCFF368XDU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF368XDU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4344a4fae136a59831461ecafc3b4818 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens GMEB1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170065;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-08-28,2020-08-14;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 2) TF ChIP-seq GMEB1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR780OXL] [Life stage: Child] [TF ChIP-seq peaks]
GMEB1 • K562 NGENC7COO3SKHK • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENC7COO3SKHK data_source ENCODE Download track Download number_of_intervals 19,880 bp_covered 10,032,445 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR928KOR biological_replicate 2 technical_replicate 2_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 391,513 downloaded_date 06/12/2022 release_date 12/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF358TZP.bed.gz processed_file_md5 9fc5ced290abc2e4ac116e1a84508ceb wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF358TZP.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF358TZP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF358TZP/@@download/ENCFF358TZP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF358TZP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 382a3182d8650f85882b921d01178508 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE127637,FactorBook:ENCSR928KOR;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2018-01-26,2016-09-20;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq GMEB1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR928KOR] [Life stage: Adult] [TF ChIP-seq peaks]
GMEB1 • K562 NGENCBJD7DTJFZ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCBJD7DTJFZ data_source ENCODE Download track Download number_of_intervals 29,365 bp_covered 16,385,797 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR928KOR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 575,344 downloaded_date 06/12/2022 release_date 12/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF705LHX.bed.gz processed_file_md5 76bd8090c8d1b17f2c8f8c60967f2fb9 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF705LHX.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF705LHX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF705LHX/@@download/ENCFF705LHX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF705LHX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cf766ec2a1ad1513c323e64e472ac4e4 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=PMCID:PMC6724667;External_resources=GEO:GSE127637,FactorBook:ENCSR928KOR;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2018-01-26,2016-09-20;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq GMEB1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR928KOR] [Life stage: Adult] [TF ChIP-seq peaks]
GMEB1 • K562 NGENCFE54L6SXR • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCFE54L6SXR data_source ENCODE Download track Download number_of_intervals 9,907 bp_covered 3,037,045 output_type conservative IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR376RCX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 193,599 downloaded_date 06/12/2022 release_date 07/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF592PDB.bed.gz processed_file_md5 29afcbccae456f58fbb290fa08666fd3 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF592PDB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF592PDB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF592PDB/@@download/ENCFF592PDB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF592PDB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 1466ff19e0b22ba64753f56b8e645457 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens GMEB1;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE170690;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-03,2020-06-30,2022-01-20;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq GMEB1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR376RCX] [Life stage: Adult] [TF ChIP-seq peaks]
GMEB1 • HepG2 NGENCGGAIOFBMI • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCGGAIOFBMI data_source ENCODE Download track Download number_of_intervals 16,225 bp_covered 9,515,419 output_type conservative IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR780OXL biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 319,382 downloaded_date 06/12/2022 release_date 08/22/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF879OQW.bed.gz processed_file_md5 d68c6880510e52c11a3db6a9e72d7c84 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF879OQW.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF879OQW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF879OQW/@@download/ENCFF879OQW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF879OQW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 83a1066a15c52a24b163295cd05d6d5b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens GMEB1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170065;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-08-28,2020-08-14;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq GMEB1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR780OXL] [Life stage: Child] [TF ChIP-seq peaks]
GMEB1 • K562 NGENCK4VP5NRHK • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCK4VP5NRHK data_source ENCODE Download track Download number_of_intervals 7,521 bp_covered 2,196,205 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR376RCX biological_replicate 2 technical_replicate 2_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 146,389 downloaded_date 06/12/2022 release_date 07/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF334XSF.bed.gz processed_file_md5 36632cd6e4ce2f7d7f4261f40a27438c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF334XSF.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF334XSF.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF334XSF/@@download/ENCFF334XSF.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF334XSF.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 444a0676a10148a7eb26c5a092173421 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens GMEB1;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE170690;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-03,2020-06-30,2022-01-20;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 2) TF ChIP-seq GMEB1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR376RCX] [Life stage: Adult] [TF ChIP-seq peaks]
GMEB1 • K562 NGENCMFHTDVWIL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCMFHTDVWIL data_source ENCODE Download track Download number_of_intervals 6,259 bp_covered 1,743,419 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR376RCX biological_replicate 1 technical_replicate 1_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 123,334 downloaded_date 06/12/2022 release_date 07/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF927CSL.bed.gz processed_file_md5 b496f6c90da75aa65a558dfab3674f27 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF927CSL.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF927CSL.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF927CSL/@@download/ENCFF927CSL.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF927CSL.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 54b66a6330d11a40729ecbbcad5e0748 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens GMEB1;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE170690;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-03,2020-06-30,2022-01-20;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1) TF ChIP-seq GMEB1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR376RCX] [Life stage: Adult] [TF ChIP-seq peaks]
GMEB1 • HepG2 NGENCPADQOA3DK • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCPADQOA3DK data_source ENCODE Download track Download number_of_intervals 21,634 bp_covered 12,945,082 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR780OXL biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 423,536 downloaded_date 06/12/2022 release_date 08/22/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434UDC.bed.gz processed_file_md5 d58340d5392a23e069b343f9dcd9745b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434UDC.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF434UDC.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF434UDC/@@download/ENCFF434UDC.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF434UDC.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 cb1e9c86e5a3b570c5f247f7645547bc data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens GMEB1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170065;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-08-28,2020-08-14;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1, 2) TF ChIP-seq GMEB1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR780OXL] [Life stage: Child] [TF ChIP-seq peaks]
GMEB1 • K562 NGENCROTIF5RRS • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq K562 TF Show metadata Download track Track metadata identifier NGENCROTIF5RRS data_source ENCODE Download track Download number_of_intervals 10,003 bp_covered 3,068,340 output_type IDR thresholded peaks genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR376RCX biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 195,302 downloaded_date 06/12/2022 release_date 07/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF679VBB.bed.gz processed_file_md5 514a3af3984e02f91a771cb13b5e6932 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF679VBB.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF679VBB.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF679VBB/@@download/ENCFF679VBB.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF679VBB.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f018974c861b49faf49dd0547ddbb8a6 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens GMEB1;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE170690;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2020-08-03,2020-06-30,2022-01-20;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,leukocyte,cancer cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K562 cell,K-562 cell,K-562;Analysis_title=ENCODE4 v1.4.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE K562 (repl. 1, 2) TF ChIP-seq GMEB1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR376RCX] [Life stage: Adult] [TF ChIP-seq peaks]
GMEB1 • HepG2 NGENCS4M2Z2KPD • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCS4M2Z2KPD data_source ENCODE Download track Download number_of_intervals 7,664 bp_covered 3,585,830 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR780OXL biological_replicate 1 technical_replicate 1_1 antibody GMEB1 assay TF ChIP-seq file_format bed narrowPeak file_size 143,091 downloaded_date 06/12/2022 release_date 08/22/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF038VJN.bed.gz processed_file_md5 27ed1d2c2571ca3f6a403d0c04515429 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF038VJN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF038VJN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF038VJN/@@download/ENCFF038VJN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF038VJN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 bf4e9806d22854b87ebb3b0fddb32ab2 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens GMEB1;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=child 15 years;Reference=NR;External_resources=GEO:GSE170065;Project=ENCODE;Award=UM1HG009411;Experiment_date_released=2020-08-28,2020-08-14;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 1) TF ChIP-seq GMEB1 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR780OXL] [Life stage: Child] [TF ChIP-seq peaks]
GMEB1 • K562 NGFTBGI5UA6Q37 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBGI5UA6Q37 data_source Factorbook Download track Download number_of_intervals 11,534 bp_covered 334,486 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR928KOR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 139,997 downloaded_date 07/10/2024 release_date 01/26/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF365ETH_TKTGTKTBTGKRTGYGTSTKTKYKTGYGW_filtered.bed.gz processed_file_md5 db60c73747dee28b0d74bba496e6b36b wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF365ETH_TKTGTKTBTGKRTGYGTSTKTKYKTGYGW_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF365ETH_TKTGTKTBTGKRTGYGTSTKTKYKTGYGW_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF365ETH_TKTGTKTBTGKRTGYGTSTKTKYKTGYGW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF365ETH_TKTGTKTBTGKRTGYGTSTKTKYKTGYGW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 765a3c93469372c99e920dc92dc1ee6f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF365ETH;ENCODE_bigBed_id=ENCFF705LHX;PMID=34755879;Motif_sequence=TKTGTKTBTGKRTGYGTSTKTKYKTGYGW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding GMEB1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR928KOR] [Life stage: Adult] [TFBS]
GMEB1 • K562 NGFTBLYZS3ADEN • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBLYZS3ADEN data_source Factorbook Download track Download number_of_intervals 46,673 bp_covered 1,353,517 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR928KOR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 684,363 downloaded_date 07/10/2024 release_date 01/26/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_TKTGTKTBTGKRTGYGTSTKTKYKTGYGW_sorted.bed.gz processed_file_md5 e713ea8829e83ebf4b61a6c2ec356aa2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_TKTGTKTBTGKRTGYGTSTKTKYKTGYGW_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_TKTGTKTBTGKRTGYGTSTKTKYKTGYGW_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF365ETH_TKTGTKTBTGKRTGYGTSTKTKYKTGYGW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF365ETH_TKTGTKTBTGKRTGYGTSTKTKYKTGYGW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 765a3c93469372c99e920dc92dc1ee6f data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF365ETH;ENCODE_bigBed_id=ENCFF705LHX;PMID=34755879;Motif_sequence=TKTGTKTBTGKRTGYGTSTKTKYKTGYGW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding GMEB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR928KOR] [Life stage: Adult] [TFBS]
GMEB1 • K562 NGFTBTT2KR2SCH • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBTT2KR2SCH data_source Factorbook Download track Download number_of_intervals 11,933 bp_covered 178,995 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR928KOR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 160,836 downloaded_date 07/10/2024 release_date 01/26/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_YGACGYMMBCRCGCM_sorted.bed.gz processed_file_md5 54380348e1ac6b8d274774cf84f17d8c wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_YGACGYMMBCRCGCM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_YGACGYMMBCRCGCM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF365ETH_YGACGYMMBCRCGCM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF365ETH_YGACGYMMBCRCGCM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e6977d116332f448218138f4e10da0d3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF365ETH;ENCODE_bigBed_id=ENCFF705LHX;PMID=34755879;Motif_sequence=YGACGYMMBCRCGCM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding GMEB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR928KOR] [Life stage: Adult] [TFBS]
GMEB1 • K562 NGFTBTVNQ623JE • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBTVNQ623JE data_source Factorbook Download track Download number_of_intervals 889 bp_covered 22,225 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR928KOR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 14,772 downloaded_date 07/10/2024 release_date 01/26/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF365ETH_ACTACAWYTCCCAGVAKGCCCYGCG_filtered.bed.gz processed_file_md5 13c647dd7a018040fec07bfcba4a0171 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF365ETH_ACTACAWYTCCCAGVAKGCCCYGCG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF365ETH_ACTACAWYTCCCAGVAKGCCCYGCG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF365ETH_ACTACAWYTCCCAGVAKGCCCYGCG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF365ETH_ACTACAWYTCCCAGVAKGCCCYGCG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 060a9c48ff4e33c0ab4931cff03faff5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF365ETH;ENCODE_bigBed_id=ENCFF705LHX;PMID=34755879;Motif_sequence=ACTACAWYTCCCAGVAKGCCCYGCG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding GMEB1 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR928KOR] [Life stage: Adult] [TFBS]
GMEB1 • K562 NGFTBWFAK5JXZV • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBWFAK5JXZV data_source Factorbook Download track Download number_of_intervals 14,336 bp_covered 358,400 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR928KOR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 272,461 downloaded_date 07/10/2024 release_date 01/26/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_ACTACAWYTCCCAGVAKGCCCYGCG_sorted.bed.gz processed_file_md5 86c5139d4e9acea2d20e4ea67513b39f wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_ACTACAWYTCCCAGVAKGCCCYGCG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_ACTACAWYTCCCAGVAKGCCCYGCG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF365ETH_ACTACAWYTCCCAGVAKGCCCYGCG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF365ETH_ACTACAWYTCCCAGVAKGCCCYGCG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 060a9c48ff4e33c0ab4931cff03faff5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF365ETH;ENCODE_bigBed_id=ENCFF705LHX;PMID=34755879;Motif_sequence=ACTACAWYTCCCAGVAKGCCCYGCG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding GMEB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR928KOR] [Life stage: Adult] [TFBS]
GMEB1 • K562 NGFTBXAVOICTHH • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBXAVOICTHH data_source Factorbook Download track Download number_of_intervals 7,639 bp_covered 114,585 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR928KOR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody GMEB1 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 114,114 downloaded_date 07/10/2024 release_date 01/26/2018 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_YGGGAAWNGTAGTYC_sorted.bed.gz processed_file_md5 c8ee68c36b83b648382c79e01435c0a4 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_YGGGAAWNGTAGTYC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF365ETH_YGGGAAWNGTAGTYC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF365ETH_YGGGAAWNGTAGTYC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF365ETH_YGGGAAWNGTAGTYC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a3bc051db24eb5c8a60f31a4a912b3e3 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF365ETH;ENCODE_bigBed_id=ENCFF705LHX;PMID=34755879;Motif_sequence=YGGGAAWNGTAGTYC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding GMEB1 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR928KOR] [Life stage: Adult] [TFBS]
GMEB2 • HepG2 NGENCECOFHOHG5 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq HepG2 TF Show metadata Download track Track metadata identifier NGENCECOFHOHG5 data_source ENCODE Download track Download number_of_intervals 2,764 bp_covered 721,466 output_type IDR thresholded peaks genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR745VSQ biological_replicate 2 technical_replicate 2_1 antibody GMEB2 assay TF ChIP-seq file_format bed narrowPeak file_size 47,344 downloaded_date 06/12/2022 release_date 12/03/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF941JSG.bed.gz processed_file_md5 2ceb67f97dcc521b70d58f129a49b511 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF941JSG.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF941JSG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF941JSG/@@download/ENCFF941JSG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF941JSG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 83975ac547c3cfe9097fc4cccc0bbcd9 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens HepG2 genetically modified (insertion) using CRISPR targeting H. sapiens GMEB2;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 15 years;Reference=PMID:32728244;External_resources=GEO:GSE96348,FactorBook:ENCSR745VSQ;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2016-11-08,2016-10-11;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HepG2;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=Hep-G2,HepG2 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name ENCODE HepG2 (repl. 2) TF ChIP-seq GMEB2 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR745VSQ] [Life stage: Child] [TF ChIP-seq peaks]