BHLHE40 • GM12878 NGFTB6K6XGIRUA • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTB6K6XGIRUA data_source Factorbook Download track Download number_of_intervals 7,392 bp_covered 110,880 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR987MTA biological_replicate 4, 5 technical_replicate 4_1, 5_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 54,518 downloaded_date 07/10/2024 release_date 01/31/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF445XYV_STGTSYRTGTGTGTG_filtered.bed.gz processed_file_md5 8674f2c83443c061c0f34d82e57c71b6 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF445XYV_STGTSYRTGTGTGTG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF445XYV_STGTSYRTGTGTGTG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF445XYV_STGTSYRTGTGTGTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF445XYV_STGTSYRTGTGTGTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0389e95dbd2815f9e183dc54039a154d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF445XYV;ENCODE_bigBed_id=ENCFF521IZR;PMID=34755879;Motif_sequence=STGTSYRTGTGTGTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 4, 5) Motif finding BHLHE40 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR987MTA] [TFBS]
BHLHE40 • K562 NGFTB7MPJSU7LE • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTB7MPJSU7LE data_source Factorbook Download track Download number_of_intervals 24,004 bp_covered 264,044 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 350,760 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_GCCCCGCCCCY_sorted.bed.gz processed_file_md5 a7d7a3da74cb8fbca295f94d03d1dd81 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_GCCCCGCCCCY_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_GCCCCGCCCCY_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF154IVU_GCCCCGCCCCY.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF154IVU_GCCCCGCCCCY.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 481629a038dab1143f6adcf3257fee33 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF154IVU;ENCODE_bigBed_id=ENCFF923NJI;PMID=34755879;Motif_sequence=GCCCCGCCCCY;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGV] [Life stage: Adult] [TFBS]
BHLHE40 • GM12878 NGFTBAUC3DVOTN • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBAUC3DVOTN data_source Factorbook Download track Download number_of_intervals 22,534 bp_covered 473,214 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR000DZJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 337,436 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF633YUQ_ACACACACACACAYACACRCA_sorted.bed.gz processed_file_md5 160224a3e7ef366ed3bf7c9ecdbb95a0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF633YUQ_ACACACACACACAYACACRCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF633YUQ_ACACACACACACAYACACRCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF633YUQ_ACACACACACACAYACACRCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF633YUQ_ACACACACACACAYACACRCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 8f8c1afc0e401bb15a3acc7af5ff44a5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF633YUQ;ENCODE_bigBed_id=ENCFF010ZUU;PMID=34755879;Motif_sequence=ACACACACACACAYACACRCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DZJ] [TFBS]
BHLHE40 • HepG2 NGFTBAX3SV54ZE • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBAX3SV54ZE data_source Factorbook Download track Download number_of_intervals 590 bp_covered 4,720 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000BID biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 6,804 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992EBV_WGYAAACA_sorted.bed.gz processed_file_md5 fb15c7d0e8d8e56e1b76d9a250660484 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992EBV_WGYAAACA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992EBV_WGYAAACA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF992EBV_WGYAAACA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF992EBV_WGYAAACA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 4b7e6803a48efbb75be0067e20a13206 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF992EBV;ENCODE_bigBed_id=ENCFF272ULI;PMID=34755879;Motif_sequence=WGYAAACA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BID] [Life stage: Child] [TFBS]
BHLHE40 • GM12878 NGFTBBXMATV6UJ • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBBXMATV6UJ data_source Factorbook Download track Download number_of_intervals 19,058 bp_covered 571,740 output_type transcription factor binding sites significant genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR987MTA biological_replicate 4, 5 technical_replicate 4_1, 5_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 266,352 downloaded_date 07/10/2024 release_date 01/31/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF445XYV_TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG_filtered.bed.gz processed_file_md5 a16984f6bc1a3e8b4de82dfcc4f4b446 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF445XYV_TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF445XYV_TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF445XYV_TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF445XYV_TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7745254ec947508aa44ce68813def54b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF445XYV;ENCODE_bigBed_id=ENCFF521IZR;PMID=34755879;Motif_sequence=TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 4, 5) Motif finding BHLHE40 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR987MTA] [TFBS]
BHLHE40 • IMR-90 NGFTBEBZX7IZYM • Factorbook34755879 Motif finding IMR-90 TFBS Show metadata Download track Track metadata identifier NGFTBEBZX7IZYM data_source Factorbook Download track Download number_of_intervals 4,924 bp_covered 103,404 output_type transcription factor binding sites significant genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR957KYB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 55,951 downloaded_date 07/10/2024 release_date 09/01/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF032HPB_ACACACACACACACACASACA_filtered.bed.gz processed_file_md5 db4546ad33b6fd71901eb92309c7eae2 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF032HPB_ACACACACACACACACASACA_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF032HPB_ACACACACACACACACASACA_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF032HPB_ACACACACACACACACASACA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF032HPB_ACACACACACACACACASACA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9eb234e290077909463100a21cef9783 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens IMR-90;Original_cell_type=IMR-90;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF032HPB;ENCODE_bigBed_id=ENCFF312JYK;PMID=34755879;Motif_sequence=ACACACACACACACACASACA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no system_category Respiratory life_stage Embryonic track_name Factorbook IMR-90 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR957KYB] [Life stage: Embryonic] [TFBS]
BHLHE40 • A549 NGFTBEFLHIZTKL • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBEFLHIZTKL data_source Factorbook Download track Download number_of_intervals 785 bp_covered 6,280 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000DYJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 8,524 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF808XJN_VTGAGTCA_sorted.bed.gz processed_file_md5 0638abb79ebb8269c578b0a7e52c25c8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF808XJN_VTGAGTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF808XJN_VTGAGTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF808XJN_VTGAGTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF808XJN_VTGAGTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 83e888ddc2381f04c6f9f8838921e5da data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF808XJN;ENCODE_bigBed_id=ENCFF980EQQ;PMID=34755879;Motif_sequence=VTGAGTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DYJ] [Life stage: Adult] [TFBS]
BHLHE40 • HepG2 NGFTBEM4SAU2Y4 • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBEM4SAU2Y4 data_source Factorbook Download track Download number_of_intervals 8,847 bp_covered 88,470 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000EDT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 113,523 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF776PGI_GCACGTGACB_sorted.bed.gz processed_file_md5 a0a68268e1ce74dfd3f3ce1f941f2ec5 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF776PGI_GCACGTGACB_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF776PGI_GCACGTGACB_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF776PGI_GCACGTGACB.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF776PGI_GCACGTGACB.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 e17fbc4ecce5740538b6c5fdb4b263f2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Michael Snyder, Stanford;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF776PGI;ENCODE_bigBed_id=ENCFF961RID;PMID=34755879;Motif_sequence=GCACGTGACB;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EDT] [Life stage: Child] [TFBS]
BHLHE40 • K562 NGFTBIY7QVGXEP • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBIY7QVGXEP data_source Factorbook Download track Download number_of_intervals 5,894 bp_covered 70,728 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 84,012 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_MGTCACGTGACC_sorted.bed.gz processed_file_md5 c300d04c9a7def9e4deab09bad72e2be wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_MGTCACGTGACC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_MGTCACGTGACC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF154IVU_MGTCACGTGACC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF154IVU_MGTCACGTGACC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c0cc9826b793906583268f64b3d1fde5 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF154IVU;ENCODE_bigBed_id=ENCFF923NJI;PMID=34755879;Motif_sequence=MGTCACGTGACC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGV] [Life stage: Adult] [TFBS]
BHLHE40 • GM12878 NGFTBMSHHPYJY5 • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBMSHHPYJY5 data_source Factorbook Download track Download number_of_intervals 18,595 bp_covered 204,545 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR987MTA biological_replicate 4, 5 technical_replicate 4_1, 5_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 256,771 downloaded_date 07/10/2024 release_date 01/31/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_GGKCACGTGMV_sorted.bed.gz processed_file_md5 64c1d21e27830e85849fceaf0f9ceabc wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_GGKCACGTGMV_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_GGKCACGTGMV_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF445XYV_GGKCACGTGMV.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF445XYV_GGKCACGTGMV.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 dce21ef02c293f48ce35ee74642308a9 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF445XYV;ENCODE_bigBed_id=ENCFF521IZR;PMID=34755879;Motif_sequence=GGKCACGTGMV;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 4, 5) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR987MTA] [TFBS]
BHLHE40 • K562 NGFTBNBOLNVREZ • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBNBOLNVREZ data_source Factorbook Download track Download number_of_intervals 13,920 bp_covered 139,200 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 177,760 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_VGTCACGTGC_sorted.bed.gz processed_file_md5 0b00100b41b6e043b53eb63f61fe7fad wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_VGTCACGTGC_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_VGTCACGTGC_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF154IVU_VGTCACGTGC.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF154IVU_VGTCACGTGC.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 a95c30aabb351260d81b88d4f6003e02 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF154IVU;ENCODE_bigBed_id=ENCFF923NJI;PMID=34755879;Motif_sequence=VGTCACGTGC;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGV] [Life stage: Adult] [TFBS]
BHLHE40 • IMR-90 NGFTBP5ST75GOZ • Factorbook34755879 Motif finding IMR-90 TFBS Show metadata Download track Track metadata identifier NGFTBP5ST75GOZ data_source Factorbook Download track Download number_of_intervals 18,010 bp_covered 378,210 output_type transcription factor binding sites all genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR957KYB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 277,232 downloaded_date 07/10/2024 release_date 09/01/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF032HPB_ACACACACACACACACASACA_sorted.bed.gz processed_file_md5 d18656ae37f5bc7327e8130cdab9a8f8 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF032HPB_ACACACACACACACACASACA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF032HPB_ACACACACACACACACASACA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF032HPB_ACACACACACACACACASACA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF032HPB_ACACACACACACACACASACA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 9eb234e290077909463100a21cef9783 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens IMR-90;Original_cell_type=IMR-90;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF032HPB;ENCODE_bigBed_id=ENCFF312JYK;PMID=34755879;Motif_sequence=ACACACACACACACACASACA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no system_category Respiratory life_stage Embryonic track_name Factorbook IMR-90 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR957KYB] [Life stage: Embryonic] [TFBS]
BHLHE40 • K562 NGFTBPUJ47G2WY • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBPUJ47G2WY data_source Factorbook Download track Download number_of_intervals 5,463 bp_covered 158,427 output_type transcription factor binding sites significant genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 76,557 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF154IVU_AYWCACACRCRCRCACACACRCACWYACW_filtered.bed.gz processed_file_md5 460a98c3677c4948ac6e39ffffbd0bc0 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF154IVU_AYWCACACRCRCRCACACACRCACWYACW_filtered.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ENCFF154IVU_AYWCACACRCRCRCACACACRCACWYACW_filtered.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/fimo_pval_filtered/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF154IVU_AYWCACACRCRCRCACACACRCACWYACW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF154IVU_AYWCACACRCRCRCACACACRCACWYACW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d0bc9f0ede7e5a2b4acfda5c90891ca0 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF154IVU;ENCODE_bigBed_id=ENCFF923NJI;PMID=34755879;Motif_sequence=AYWCACACRCRCRCACACACRCACWYACW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites significant (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGV] [Life stage: Adult] [TFBS]
BHLHE40 • GM12878 NGFTBRZHZMT72H • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBRZHZMT72H data_source Factorbook Download track Download number_of_intervals 58,755 bp_covered 1,762,650 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR987MTA biological_replicate 4, 5 technical_replicate 4_1, 5_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 919,115 downloaded_date 07/10/2024 release_date 01/31/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG_sorted.bed.gz processed_file_md5 07ddfd73e805ff659405d2e7f5302c55 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF445XYV_TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF445XYV_TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 7745254ec947508aa44ce68813def54b data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF445XYV;ENCODE_bigBed_id=ENCFF521IZR;PMID=34755879;Motif_sequence=TGTGTGTGTGYGTGTGTGTGTGYGTGTGYG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 4, 5) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR987MTA] [TFBS]
BHLHE40 • K562 NGFTBSDOCYW3M4 • Factorbook34755879 Motif finding K562 TFBS Show metadata Download track Track metadata identifier NGFTBSDOCYW3M4 data_source Factorbook Download track Download number_of_intervals 22,904 bp_covered 664,216 output_type transcription factor binding sites all genome_build hg38 cell_type K562 biosample_type Cell line biosample_term_id EFO:0002067 tissue_category Blood encode_experiment_id ENCSR000EGV biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 374,562 downloaded_date 07/10/2024 release_date 10/29/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_AYWCACACRCRCRCACACACRCACWYACW_sorted.bed.gz processed_file_md5 50a97c667fa650885a199d8b299ff922 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_AYWCACACRCRCRCACACACRCACWYACW_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF154IVU_AYWCACACRCRCRCACACACRCACWYACW_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF154IVU_AYWCACACRCRCRCACACACRCACWYACW.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF154IVU_AYWCACACRCRCRCACACACRCACWYACW.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 d0bc9f0ede7e5a2b4acfda5c90891ca0 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens K562;Original_cell_type=K562;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF154IVU;ENCODE_bigBed_id=ENCFF923NJI;PMID=34755879;Motif_sequence=AYWCACACRCRCRCACACACRCACWYACW;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name Factorbook K562 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000EGV] [Life stage: Adult] [TFBS]
BHLHE40 • HepG2 NGFTBV732ZCU2O • Factorbook34755879 Motif finding HepG2 TFBS Show metadata Download track Track metadata identifier NGFTBV732ZCU2O data_source Factorbook Download track Download number_of_intervals 2,866 bp_covered 28,660 output_type transcription factor binding sites all genome_build hg38 cell_type HepG2 biosample_type Cell line biosample_term_id EFO:0001187 tissue_category Liver encode_experiment_id ENCSR000BID biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 33,081 downloaded_date 07/10/2024 release_date 07/18/2011 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992EBV_VKCACGTGMM_sorted.bed.gz processed_file_md5 dbf12ab97f9c212fe1226014e9378016 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992EBV_VKCACGTGMM_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF992EBV_VKCACGTGMM_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF992EBV_VKCACGTGMM.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF992EBV_VKCACGTGMM.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 f5a795e48e8d6551db8a1e22c193697a data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens HepG2;Original_cell_type=HepG2;Lab=Richard Myers, HAIB;System=exocrine system,endocrine system,digestive system;ENCODE_BED_id=ENCFF992EBV;ENCODE_bigBed_id=ENCFF272ULI;PMID=34755879;Motif_sequence=VKCACGTGMM;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001187;is_hg38_lifted=no system_category Digestive life_stage Child track_name Factorbook HepG2 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000BID] [Life stage: Child] [TFBS]
BHLHE40 • IMR-90 NGFTBW33UODQFW • Factorbook34755879 Motif finding IMR-90 TFBS Show metadata Download track Track metadata identifier NGFTBW33UODQFW data_source Factorbook Download track Download number_of_intervals 11,808 bp_covered 94,464 output_type transcription factor binding sites all genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR957KYB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 114,816 downloaded_date 07/10/2024 release_date 09/01/2016 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF032HPB_VTGACTCA_sorted.bed.gz processed_file_md5 fd281576c277dc7763d1fcde1f6232fb wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF032HPB_VTGACTCA_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF032HPB_VTGACTCA_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF032HPB_VTGACTCA.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF032HPB_VTGACTCA.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 2ee2c096b475ff2ae302c0d1876b77e1 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens IMR-90;Original_cell_type=IMR-90;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF032HPB;ENCODE_bigBed_id=ENCFF312JYK;PMID=34755879;Motif_sequence=VTGACTCA;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no system_category Respiratory life_stage Embryonic track_name Factorbook IMR-90 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR957KYB] [Life stage: Embryonic] [TFBS]
BHLHE40 • GM12878 NGFTBWOEJZ2QYJ • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBWOEJZ2QYJ data_source Factorbook Download track Download number_of_intervals 27,997 bp_covered 419,955 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR987MTA biological_replicate 4, 5 technical_replicate 4_1, 5_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 351,715 downloaded_date 07/10/2024 release_date 01/31/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_STGTSYRTGTGTGTG_sorted.bed.gz processed_file_md5 9c66fbfdda8996557249ec59935b1232 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_STGTSYRTGTGTGTG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_STGTSYRTGTGTGTG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF445XYV_STGTSYRTGTGTGTG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF445XYV_STGTSYRTGTGTGTG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 0389e95dbd2815f9e183dc54039a154d data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF445XYV;ENCODE_bigBed_id=ENCFF521IZR;PMID=34755879;Motif_sequence=STGTSYRTGTGTGTG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 4, 5) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR987MTA] [TFBS]
BHLHE40 • GM12878 NGFTBX6DRZU6M6 • Factorbook34755879 Motif finding GM12878 TFBS Show metadata Download track Track metadata identifier NGFTBX6DRZU6M6 data_source Factorbook Download track Download number_of_intervals 13,711 bp_covered 150,821 output_type transcription factor binding sites all genome_build hg38 cell_type GM12878 biosample_type Cell line biosample_term_id EFO:0002784 tissue_category Blood encode_experiment_id ENCSR987MTA biological_replicate 4, 5 technical_replicate 4_1, 5_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 181,462 downloaded_date 07/10/2024 release_date 01/31/2017 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_SGGTCACGTGR_sorted.bed.gz processed_file_md5 917dbb4a55cd6b251d0fde9b3df09ea9 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_SGGTCACGTGR_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF445XYV_SGGTCACGTGR_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF445XYV_SGGTCACGTGR.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF445XYV_SGGTCACGTGR.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 163b5027135220b5e156a3fc4fdfab96 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens GM12878;Original_cell_type=GM12878;Lab=Michael Snyder, Stanford;System=immune system;ENCODE_BED_id=ENCFF445XYV;ENCODE_bigBed_id=ENCFF521IZR;PMID=34755879;Motif_sequence=SGGTCACGTGR;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0002784;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name Factorbook GM12878 (repl. 4, 5) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR987MTA] [TFBS]
BHLHE40 • A549 NGFTBXGMM2TNM4 • Factorbook34755879 Motif finding A549 TFBS Show metadata Download track Track metadata identifier NGFTBXGMM2TNM4 data_source Factorbook Download track Download number_of_intervals 4,125 bp_covered 86,625 output_type transcription factor binding sites all genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR000DYJ biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody BHLHE40 assay Motif finding file_format bed bed6+11 FactorbookMotif file_size 85,001 downloaded_date 07/10/2024 release_date 05/14/2012 date_added_to_filer 09/24/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF808XJN_VSVRSSVGGCACGTGMSSSSG_sorted.bed.gz processed_file_md5 a0fe3073cd245ea3885b445490c4bbb3 wget_command wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF808XJN_VSVRSSVGGCACGTGMSSSSG_sorted.bed.gz -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ENCFF808XJN_VSVRSSVGGCACGTGMSSSSG_sorted.bed.gz.tbi -P FILER2/Annotationtracks/Factorbook/motifs/all/bed17/hg38/ link_out_url https://www.factorbook.org/ raw_file_url https://screen-beta-api.wenglab.org/factorbook_downloads/hq-occurrences/ENCFF808XJN_VSVRSSVGGCACGTGMSSSSG.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/FACTORBOOK/motifs/ENCFF808XJN_VSVRSSVGGCACGTGMSSSSG.gz -P FILER2/Annotationtracks/Downloads/FACTORBOOK/motifs/ raw_file_md5 c861a1db6091565c2e67a68739c3ece2 data_category TFBS [Transcription Factor Binding Site] Genomic feature type Factorbook transcription factor binding sites track_description version=2022;Biosample_summary=Homo sapiens A549;Original_cell_type=A549;Lab=Michael Snyder, Stanford;System=respiratory system;ENCODE_BED_id=ENCFF808XJN;ENCODE_bigBed_id=ENCFF980EQQ;PMID=34755879;Motif_sequence=VSVRSSVGGCACGTGMSSSSG;schema=BED6+11;dataSource_pubmed_id=34755879;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/Factorbook.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name Factorbook A549 (repl. 1, 2) Motif finding BHLHE40 transcription factor binding sites all (bed6+11 FactorbookMotif) [Experiment: ENCSR000DYJ] [Life stage: Adult] [TFBS]