H2BK12ac • H1-hESC NGENCF5K7H4MGO • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGENCF5K7H4MGO data_source ENCODE Download track Download number_of_intervals 114,515 bp_covered 52,622,736 output_type pseudoreplicated peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR364BKW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H2BK12ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,504,069 downloaded_date 06/12/2022 release_date 11/19/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF505KWX.bed.gz processed_file_md5 3d1fc82ab8550fa377414b22f38e026f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF505KWX.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF505KWX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF505KWX/@@download/ENCFF505KWX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF505KWX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2641a67c1b79d1302b73a41ef4a847ff data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK12ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM605296,GEO:GSM605297;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1, 2) Histone ChIP-seq H2BK12ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR364BKW] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • IMR-90 NGENCFCZKBX7JH • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGENCFCZKBX7JH data_source ENCODE Download track Download number_of_intervals 160,576 bp_covered 60,681,447 output_type pseudoreplicated peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR523ENE biological_replicate 2 technical_replicate 2_1 antibody H2BK12ac assay Histone ChIP-seq file_format bed narrowPeak file_size 4,003,873 downloaded_date 06/12/2022 release_date 11/19/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF598HSJ.bed.gz processed_file_md5 dfdd2a99fcc22770dfedf93507f1d30c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF598HSJ.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF598HSJ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF598HSJ/@@download/ENCFF598HSJ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF598HSJ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 99fb82a78777864fb1043d87b4c3264e data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK12ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens IMR-90;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=embryonic 16 weeks;Reference=NR;External_resources=GEO:GSM521874,GEO:GSM521871;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=IMR-90;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=IMR90;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Respiratory life_stage Embryonic track_name ENCODE IMR-90 (repl. 2) Histone ChIP-seq H2BK12ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR523ENE] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • H1-hESC NGENCN3ARQD4KZ • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGENCN3ARQD4KZ data_source ENCODE Download track Download number_of_intervals 29,663 bp_covered 18,850,259 output_type pseudoreplicated peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR364BKW biological_replicate 1 technical_replicate 1_1 antibody H2BK12ac assay Histone ChIP-seq file_format bed narrowPeak file_size 675,664 downloaded_date 06/12/2022 release_date 11/19/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF940ECS.bed.gz processed_file_md5 a1ece667aabb3bce56e259e7ac72a431 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF940ECS.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF940ECS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF940ECS/@@download/ENCFF940ECS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF940ECS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 4069dea1a41cf166507231f5d40b0e1b data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK12ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM605296,GEO:GSM605297;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1) Histone ChIP-seq H2BK12ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR364BKW] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • Trophoblast NGENCNBJVM7ORB • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGENCNBJVM7ORB data_source ENCODE Download track Download number_of_intervals 98,014 bp_covered 30,300,771 output_type replicated peaks genome_build hg38 cell_type Trophoblast biosample_type Primary cell biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id ENCSR634IIF biological_replicate 1, 2 technical_replicate 1_1, 2_2 antibody H2BK12ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,237,027 downloaded_date 06/12/2022 release_date 11/13/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF260PNP.bed.gz processed_file_md5 c4e6eba2832593e5049b4f453ecf2df9 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF260PNP.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF260PNP.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF260PNP/@@download/ENCFF260PNP.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF260PNP.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 a8dc23d3cb241bacbaab61c3a72d1e99 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK12ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens trophoblast cell originated from H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM908943,GEO:GSM906390;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=trophoblast cell;ENCODE_cell_slims=NR;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=trophoblastic cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000351;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE Trophoblast (repl. 1, 2) Histone ChIP-seq H2BK12ac replicated peaks (narrowPeak) [Experiment: ENCSR634IIF] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • Trophoblast NGENCNHT2XLH4L • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGENCNHT2XLH4L data_source ENCODE Download track Download number_of_intervals 61,991 bp_covered 22,659,751 output_type pseudoreplicated peaks genome_build hg38 cell_type Trophoblast biosample_type Primary cell biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id ENCSR634IIF biological_replicate 2 technical_replicate 2_2 antibody H2BK12ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,418,859 downloaded_date 06/12/2022 release_date 11/13/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF534HUA.bed.gz processed_file_md5 265dac0edbf9fcf5188de6f0f459ea67 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF534HUA.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF534HUA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF534HUA/@@download/ENCFF534HUA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF534HUA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 153a51c330d062f00de3eaa906f0099b data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK12ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens trophoblast cell originated from H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM908943,GEO:GSM906390;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=trophoblast cell;ENCODE_cell_slims=NR;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=trophoblastic cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000351;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE Trophoblast (repl. 2) Histone ChIP-seq H2BK12ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR634IIF] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • H9 NGENCOUQUWJKSS • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGENCOUQUWJKSS data_source ENCODE Download track Download number_of_intervals 4,228 bp_covered 1,082,918 output_type pseudoreplicated peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id ENCSR738BJJ biological_replicate 1, 2 technical_replicate 1_1, 2_3 antibody H2BK12ac assay Histone ChIP-seq file_format bed narrowPeak file_size 90,800 downloaded_date 06/12/2022 release_date 11/19/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF684SRN.bed.gz processed_file_md5 e353b29b29a303147bb9195501bb55d4 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF684SRN.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF684SRN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF684SRN/@@download/ENCFF684SRN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF684SRN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 1720e6826f0b1c485f587704d5c7b4dd data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK12ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens H9;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=embryonic 5 days;Reference=PMID:32728046;External_resources=GEO:GSM667611,GEO:GSM667610;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=H9;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE H9 (repl. 1, 2) Histone ChIP-seq H2BK12ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR738BJJ] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • H9 NGENCS35SYTRTC • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGENCS35SYTRTC data_source ENCODE Download track Download number_of_intervals 3,165 bp_covered 865,874 output_type replicated peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id ENCSR738BJJ biological_replicate 1, 2 technical_replicate 1_1, 2_3 antibody H2BK12ac assay Histone ChIP-seq file_format bed narrowPeak file_size 69,208 downloaded_date 06/12/2022 release_date 11/19/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF303UUQ.bed.gz processed_file_md5 5353f4ff1172ee962bbf4fc9da661a1f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF303UUQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF303UUQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF303UUQ/@@download/ENCFF303UUQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF303UUQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e73565c0dbb9dffa639fb55b360f100d data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK12ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens H9;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=embryonic 5 days;Reference=PMID:32728046;External_resources=GEO:GSM667611,GEO:GSM667610;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H9;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE H9 (repl. 1, 2) Histone ChIP-seq H2BK12ac replicated peaks (narrowPeak) [Experiment: ENCSR738BJJ] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • Mesenchymal stem cell NGENCTNJELI3PC • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGENCTNJELI3PC data_source ENCODE Download track Download number_of_intervals 73,232 bp_covered 26,105,319 output_type pseudoreplicated peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id ENCSR250VGX biological_replicate 1 technical_replicate 1_2 antibody H2BK12ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,581,854 downloaded_date 06/12/2022 release_date 11/13/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF819MMT.bed.gz processed_file_md5 49a3bd818a7ce8f6738205ffc026b9a4 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF819MMT.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF819MMT.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF819MMT/@@download/ENCFF819MMT.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF819MMT.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c1290d1a56cdda9cc0a33154169e9bc0 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK12ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens mesenchymal stem cell originated from H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM818014;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=mesenchymal stem cell;ENCODE_cell_slims=stem cell,connective tissue cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000134;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Skeletal life_stage Embryonic track_name ENCODE Mesenchymal stem cell (repl. 1) Histone ChIP-seq H2BK12ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR250VGX] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • H1-hESC NGENCTUWA5P73A • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGENCTUWA5P73A data_source ENCODE Download track Download number_of_intervals 66,685 bp_covered 33,227,822 output_type replicated peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR364BKW biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H2BK12ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,545,882 downloaded_date 06/12/2022 release_date 11/19/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF309AEF.bed.gz processed_file_md5 10bba100dcd84861cd84c55933b8bf62 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF309AEF.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF309AEF.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF309AEF/@@download/ENCFF309AEF.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF309AEF.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 b90cc6968970a8410ee2f6c33d21a8fe data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK12ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM605296,GEO:GSM605297;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1, 2) Histone ChIP-seq H2BK12ac replicated peaks (narrowPeak) [Experiment: ENCSR364BKW] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • Mesenchymal stem cell NGENCUOC74ERR7 • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGENCUOC74ERR7 data_source ENCODE Download track Download number_of_intervals 136,112 bp_covered 36,031,621 output_type pseudoreplicated peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id ENCSR895YWA biological_replicate 1 technical_replicate 1_1 antibody H2BK12ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,944,699 downloaded_date 06/12/2022 release_date 11/12/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF718RVU.bed.gz processed_file_md5 aec821bcf0bf928c33a3917a160009a9 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF718RVU.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF718RVU.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF718RVU/@@download/ENCFF718RVU.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF718RVU.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c4bdb09de0c49c482547094ff8d61112 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK12ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens mesenchymal stem cell originated from H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM818015;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=mesenchymal stem cell;ENCODE_cell_slims=stem cell,connective tissue cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000134;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Skeletal life_stage Embryonic track_name ENCODE Mesenchymal stem cell (repl. 1) Histone ChIP-seq H2BK12ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR895YWA] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • Trophoblast NGRMP2ZZVF2SWN • ROADMAP [lifted]25693563 ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGRMP2ZZVF2SWN data_source ROADMAP-lifted Download track Download number_of_intervals 184,794 bp_covered 47,437,552 output_type peaks genome_build hg38 cell_type Trophoblast biosample_type In vitro differentiated cells biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK12ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 5,621,334 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY72.narrowPeak.lifted.bed.gz processed_file_md5 88d652a3f0a1b5babe3d90870d871faf wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY72.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY72.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY72.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY72.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 9624e952b9de8a7b089f0567c62c5238 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK12ac peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Trophoblast Cultured Cells;Donor=AY72;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted Trophoblast ChIP-seq H2BK12ac-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • H9 NGRMP4K2P6RLJQ • ROADMAP [lifted]25693563 ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGRMP4K2P6RLJQ data_source ROADMAP-lifted Download track Download number_of_intervals 90,693 bp_covered 181,691,912 output_type peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK12ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 4,467,735 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H9.H2BK12ac.AK112.gappedPeak.lifted.bed.gz processed_file_md5 0b9c96abc2945131ae689e1e9563ada9 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H9.H2BK12ac.AK112.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H9.H2BK12ac.AK112.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H9.H2BK12ac.AK112.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H9.H2BK12ac.AK112.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 778600d0a97abd4f2d24b49cf4d24445 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK12ac peaks track_description version=2015;Original_cell_type=H9;Donor=AK112;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted H9 ChIP-seq H2BK12ac-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • IMR-90 NGRMP5S3QDKWAG • ROADMAP [lifted]25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMP5S3QDKWAG data_source ROADMAP-lifted Download track Download number_of_intervals 98,787 bp_covered 227,451,102 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK12ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 5,551,293 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK12ac.YL18.gappedPeak.lifted.bed.gz processed_file_md5 d2bca515e0c913c13ce8b1a5de50c47f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK12ac.YL18.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK12ac.YL18.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.IMR90.H2BK12ac.YL18.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.IMR90.H2BK12ac.YL18.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 c6b091a47d22bfb0b1593fb50d945364 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK12ac peaks track_description version=2015;Original_cell_type=IMR 90;Donor=YL18;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP-lifted IMR-90 ChIP-seq H2BK12ac-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H2BK12ac • H1-hESC NGRMP5WSAZHIGH • ROADMAP [lifted]25693563 ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGRMP5WSAZHIGH data_source ROADMAP-lifted Download track Download number_of_intervals 126,561 bp_covered 155,524,144 output_type peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK12ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 6,188,976 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1.H2BK12ac.SAK203.gappedPeak.lifted.bed.gz processed_file_md5 074ac3c6869b4220e6bd34ac13506e95 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1.H2BK12ac.SAK203.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1.H2BK12ac.SAK203.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1.H2BK12ac.SAK203.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1.H2BK12ac.SAK203.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 caaf1de9ff3b346a389a6df71b7718b8 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK12ac peaks track_description version=2015;Original_cell_type=H1;Donor=SAK203;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted H1-hESC ChIP-seq H2BK12ac-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • Trophoblast NGRMP6ILZLSDXQ • ROADMAP [lifted]25693563 ChIP-seq Trophoblast Histone Show metadata Download track Track metadata identifier NGRMP6ILZLSDXQ data_source ROADMAP-lifted Download track Download number_of_intervals 98,049 bp_covered 214,069,867 output_type peaks genome_build hg38 cell_type Trophoblast biosample_type In vitro differentiated cells biosample_term_id UBERON:0000088 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK12ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 5,158,769 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY72.gappedPeak.lifted.bed.gz processed_file_md5 302c429638a6f6d8e94c5bb0ac56f51f wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY72.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY72.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY72.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_BMP4_Derived_Trophoblast_Cultured_Cells.H2BK12ac.AY72.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 4f5d381436a7d04102660dd55b28e090 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK12ac peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Trophoblast Cultured Cells;Donor=AY72;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted Trophoblast ChIP-seq H2BK12ac-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • IMR-90 NGRMPAVU3BGW3Z • ROADMAP [lifted]25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMPAVU3BGW3Z data_source ROADMAP-lifted Download track Download number_of_intervals 500,673 bp_covered 420,324,685 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK12ac assay ChIP-seq file_format bed broadPeak-lifted file_size 16,271,451 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.IMR90.H2BK12ac.YL18.broadPeak.lifted.bed.gz processed_file_md5 abdbae92b4da8265bf0edeb6d163febc wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.IMR90.H2BK12ac.YL18.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.IMR90.H2BK12ac.YL18.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.IMR90.H2BK12ac.YL18.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.IMR90.H2BK12ac.YL18.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 52d7393df6976da7e488481c7c1e53f4 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK12ac peaks track_description version=2015;Original_cell_type=IMR 90;Donor=YL18;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP-lifted IMR-90 ChIP-seq H2BK12ac-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]
H2BK12ac • Mesenchymal stem cell NGRMPCRSQUW3J3 • ROADMAP [lifted]25693563 ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGRMPCRSQUW3J3 data_source ROADMAP-lifted Download track Download number_of_intervals 369,269 bp_covered 84,728,773 output_type peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK12ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 11,110,171 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK12ac.AK281.narrowPeak.lifted.bed.gz processed_file_md5 6ea7a094623503e9fbb35845f549023b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK12ac.AK281.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK12ac.AK281.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK12ac.AK281.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.H1_Derived_Mesenchymal_Stem_Cells.H2BK12ac.AK281.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 535cf1a9a41039697215005d02b8c280 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK12ac peaks track_description version=2015;Original_cell_type=H1 Derived Mesenchymal Stem Cells;Donor=AK281;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Skeletal life_stage Embryonic track_name ROADMAP-lifted Mesenchymal stem cell ChIP-seq H2BK12ac-histone-mark peaks (narrowPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • H9 NGRMPDG44J54LK • ROADMAP [lifted]25693563 ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGRMPDG44J54LK data_source ROADMAP-lifted Download track Download number_of_intervals 842,305 bp_covered 706,992,100 output_type peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK12ac assay ChIP-seq file_format bed broadPeak-lifted file_size 27,517,314 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H2BK12ac.AK30.broadPeak.lifted.bed.gz processed_file_md5 ae3312058765c6715cebbe2efc92f348 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H2BK12ac.AK30.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H2BK12ac.AK30.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H9.H2BK12ac.AK30.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H9.H2BK12ac.AK30.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 0c8fade3c7bcd2fdeac83df1128680ff data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK12ac peaks track_description version=2015;Original_cell_type=H9;Donor=AK30;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted H9 ChIP-seq H2BK12ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK12ac • IMR-90 NGRMPDMVIDDJPG • ROADMAP [lifted]25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMPDMVIDDJPG data_source ROADMAP-lifted Download track Download number_of_intervals 191,485 bp_covered 53,325,602 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK12ac assay ChIP-seq file_format bed narrowPeak-lifted file_size 6,342,051 downloaded_date 08/15/2018 release_date 11/30/2014 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.IMR90.H2BK12ac.YL68.narrowPeak.lifted.bed.gz processed_file_md5 1dd6fd061f122b81d279191d9e04997c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.IMR90.H2BK12ac.YL68.narrowPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/UCSD.IMR90.H2BK12ac.YL68.narrowPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/narrowPeak/UCSD.IMR90.H2BK12ac.YL68.narrowPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/narrowpeak/UCSD.IMR90.H2BK12ac.YL68.narrowPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/narrowpeak/ raw_file_md5 61bf931cd2d14a3a02597f39dce1d94d data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK12ac peaks track_description version=2015;Original_cell_type=IMR 90;Donor=YL68;schema=BED3+10;dataSource_pubmed_id=25693563;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP-lifted IMR-90 ChIP-seq H2BK12ac-histone-mark peaks (narrowPeak-lifted) [Histone ChIP-seq peaks]
H2BK12ac • IMR-90 NGRMPDYG7GIH5W • ROADMAP [lifted]25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMPDYG7GIH5W data_source ROADMAP-lifted Download track Download number_of_intervals 361,734 bp_covered 401,354,741 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK12ac assay ChIP-seq file_format bed broadPeak-lifted file_size 11,819,459 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.IMR90.H2BK12ac.YL138.broadPeak.lifted.bed.gz processed_file_md5 4cc9ef4c786e66a2592940ae2ab4d2e5 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.IMR90.H2BK12ac.YL138.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.IMR90.H2BK12ac.YL138.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.IMR90.H2BK12ac.YL138.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.IMR90.H2BK12ac.YL138.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 51c1fcb7401a8a40fabd38005c5ee3e4 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK12ac peaks track_description version=2015;Original_cell_type=IMR 90;Donor=YL138;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP-lifted IMR-90 ChIP-seq H2BK12ac-histone-mark peaks (broadPeak-lifted) [Histone ChIP-seq peaks]