H2BK15ac • Neuronal stem cell NGENCJYQSENJN6 • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Neuronal stem cell Histone Show metadata Download track Track metadata identifier NGENCJYQSENJN6 data_source ENCODE Download track Download number_of_intervals 60,594 bp_covered 32,390,674 output_type pseudoreplicated peaks genome_build hg38 cell_type Neuronal stem cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Embryo encode_experiment_id ENCSR123JZO biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H2BK15ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,361,846 downloaded_date 06/12/2022 release_date 11/13/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF371NNE.bed.gz processed_file_md5 823bc67e70df002a7244b635370278a1 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF371NNE.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF371NNE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF371NNE/@@download/ENCFF371NNE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF371NNE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 166a4ab672a46d096ad374837ffab933 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK15ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens neuronal stem cell originated from H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM956004,GEO:GSM956003;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=neuronal stem cell;ENCODE_cell_slims=stem cell,neural cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NSC,neuronal stem cell,neural stem cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000047;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE Neuronal stem cell (repl. 1, 2) Histone ChIP-seq H2BK15ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR123JZO] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • IMR-90 NGENCKVBZYFMN6 • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGENCKVBZYFMN6 data_source ENCODE Download track Download number_of_intervals 52,125 bp_covered 39,702,446 output_type pseudoreplicated peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR274TJB biological_replicate 3 technical_replicate 3_1 antibody H2BK15ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,339,607 downloaded_date 06/12/2022 release_date 11/20/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF887BZQ.bed.gz processed_file_md5 cc797162b0feea18a77697e3bcf5a320 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF887BZQ.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF887BZQ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF887BZQ/@@download/ENCFF887BZQ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF887BZQ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ea45b055d5d5c20e26cbcc0de31ef4b7 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK15ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens IMR-90;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=embryonic 16 weeks;Reference=NR;External_resources=GEO:GSM521875,GEO:GSM521877,GEO:GSM521878;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep3-pr1_vs_rep3-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=IMR-90;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=IMR90;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Respiratory life_stage Embryonic track_name ENCODE IMR-90 (repl. 3) Histone ChIP-seq H2BK15ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR274TJB] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • Mesendoderm NGENCLY4MV5NF4 • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Mesendoderm Histone Show metadata Download track Track metadata identifier NGENCLY4MV5NF4 data_source ENCODE Download track Download number_of_intervals 19,477 bp_covered 4,999,550 output_type pseudoreplicated peaks genome_build hg38 cell_type Mesendoderm biosample_type In vitro differentiated cells biosample_term_id BTO:0003953 tissue_category Embryo encode_experiment_id ENCSR297AUZ biological_replicate 2 technical_replicate 2_1 antibody H2BK15ac assay Histone ChIP-seq file_format bed narrowPeak file_size 362,772 downloaded_date 06/12/2022 release_date 11/19/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF991RGN.bed.gz processed_file_md5 ab2f6828220d0c20b749630cdcfcc1c2 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF991RGN.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF991RGN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF991RGN/@@download/ENCFF991RGN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF991RGN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 5a0d04232fe723f0dd9bafb200f8f8d3 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK15ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens mesendoderm originated from H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM1013119,GEO:GSM956002;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=mesendoderm;ENCODE_cell_slims=NR;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE Mesendoderm (repl. 2) Histone ChIP-seq H2BK15ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR297AUZ] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • Mesenchymal stem cell NGENCRTTRFFMVY • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq Mesenchymal stem cell Histone Show metadata Download track Track metadata identifier NGENCRTTRFFMVY data_source ENCODE Download track Download number_of_intervals 68,856 bp_covered 17,755,068 output_type pseudoreplicated peaks genome_build hg38 cell_type Mesenchymal stem cell biosample_type Stem cell biosample_term_id CL:0000134 tissue_category Connective Tissue encode_experiment_id ENCSR491CCY biological_replicate 1 technical_replicate 1_1 antibody H2BK15ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,441,564 downloaded_date 06/12/2022 release_date 11/13/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF495RGA.bed.gz processed_file_md5 1037552c6bb46a502724aff9db18055c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF495RGA.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF495RGA.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF495RGA/@@download/ENCFF495RGA.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF495RGA.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 0711b0d5c99b7c0ba42a9cc8e03f0d52 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK15ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens mesenchymal stem cell originated from H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM1013120;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=mesenchymal stem cell;ENCODE_cell_slims=stem cell,connective tissue cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000134;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Skeletal life_stage Embryonic track_name ENCODE Mesenchymal stem cell (repl. 1) Histone ChIP-seq H2BK15ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR491CCY] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • IMR-90 NGENCTJ6EV66HI • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGENCTJ6EV66HI data_source ENCODE Download track Download number_of_intervals 26,403 bp_covered 6,975,021 output_type pseudoreplicated peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR274TJB biological_replicate 2 technical_replicate 2_2 antibody H2BK15ac assay Histone ChIP-seq file_format bed narrowPeak file_size 601,410 downloaded_date 06/12/2022 release_date 11/20/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF407JLK.bed.gz processed_file_md5 2bc2d18b987e2c883dca93fbad44f6b6 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF407JLK.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF407JLK.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF407JLK/@@download/ENCFF407JLK.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF407JLK.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 12e30858a4aae2f1e8f7b241cec62b8a data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK15ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens IMR-90;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=embryonic 16 weeks;Reference=NR;External_resources=GEO:GSM521875,GEO:GSM521877,GEO:GSM521878;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=IMR-90;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=IMR90;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Respiratory life_stage Embryonic track_name ENCODE IMR-90 (repl. 2) Histone ChIP-seq H2BK15ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR274TJB] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • H1-hESC NGENCUAYIWECLY • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGENCUAYIWECLY data_source ENCODE Download track Download number_of_intervals 54,389 bp_covered 14,795,869 output_type pseudoreplicated peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR739BZR biological_replicate 1 technical_replicate 1_1 antibody H2BK15ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,071,652 downloaded_date 06/12/2022 release_date 11/19/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF346KMC.bed.gz processed_file_md5 4704c6d129d7f67d268a5a28f56585fa wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF346KMC.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF346KMC.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF346KMC/@@download/ENCFF346KMC.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF346KMC.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c760327c8d85f4d02c2466085aaca1fb data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK15ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM605299,GEO:GSM605298;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1) Histone ChIP-seq H2BK15ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR739BZR] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • H9 NGENCUXE22SZUB • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGENCUXE22SZUB data_source ENCODE Download track Download number_of_intervals 2,257 bp_covered 392,150 output_type pseudoreplicated peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id ENCSR734NCK biological_replicate 1 technical_replicate 1_1 antibody H2BK15ac assay Histone ChIP-seq file_format bed narrowPeak file_size 41,904 downloaded_date 06/12/2022 release_date 11/19/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF116FZV.bed.gz processed_file_md5 e93b6d1a21c4b57486f2e72e63b07714 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF116FZV.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF116FZV.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF116FZV/@@download/ENCFF116FZV.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF116FZV.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 06b6d6eeb47bfc5f8be0a41a23c103d1 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK15ac pseudoreplicated peaks track_description version=2024;Biosample_summary=Homo sapiens H9;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=embryonic 5 days;Reference=PMID:32728046;External_resources=GEO:GSM706062,GEO:GSM864034;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H9;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE H9 (repl. 1) Histone ChIP-seq H2BK15ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR734NCK] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • IMR-90 NGENCWHCONEBHI • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGENCWHCONEBHI data_source ENCODE Download track Download number_of_intervals 77,693 bp_covered 46,246,382 output_type replicated peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR274TJB biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H2BK15ac assay Histone ChIP-seq file_format bed narrowPeak file_size 2,100,409 downloaded_date 06/12/2022 release_date 11/20/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF868SGG.bed.gz processed_file_md5 5378ad7fcf99e0f07667b435c1775524 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF868SGG.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF868SGG.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF868SGG/@@download/ENCFF868SGG.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF868SGG.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 d349b97cea711fa0c4f6eaab6bad8afe data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK15ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens IMR-90;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=embryonic 16 weeks;Reference=NR;External_resources=GEO:GSM521875,GEO:GSM521877,GEO:GSM521878;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=IMR-90;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=IMR90;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;Bio_rep=1, 2, 3;Tech_rep=1_1, 2_2, 3_1;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Respiratory life_stage Embryonic track_name ENCODE IMR-90 (repl. 1, 2) Histone ChIP-seq H2BK15ac replicated peaks (narrowPeak) [Experiment: ENCSR274TJB] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • H1-hESC NGENCWHWQI2YOC • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq H1-hESC Histone Show metadata Download track Track metadata identifier NGENCWHWQI2YOC data_source ENCODE Download track Download number_of_intervals 81,924 bp_covered 22,888,256 output_type replicated peaks genome_build hg38 cell_type H1-hESC biosample_type Stem cell biosample_term_id EFO:0003042 tissue_category Embryo encode_experiment_id ENCSR739BZR biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody H2BK15ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,656,349 downloaded_date 06/12/2022 release_date 11/19/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF992UPF.bed.gz processed_file_md5 cc4efc11c3c8a54e3ba4a579ef53e26c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF992UPF.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF992UPF.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF992UPF/@@download/ENCFF992UPF.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF992UPF.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 f49c11702f1f7588099137c6842f99b2 data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK15ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM605299,GEO:GSM605298;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Embryo life_stage Embryonic track_name ENCODE H1-hESC (repl. 1, 2) Histone ChIP-seq H2BK15ac replicated peaks (narrowPeak) [Experiment: ENCSR739BZR] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • IMR-90 NGENCYAGTHE7CN • ENCODE22955616 | 41168159 | 31713622 Histone ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGENCYAGTHE7CN data_source ENCODE Download track Download number_of_intervals 60,198 bp_covered 40,655,631 output_type replicated peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id ENCSR274TJB biological_replicate 2, 3 technical_replicate 2_1, 3_1 antibody H2BK15ac assay Histone ChIP-seq file_format bed narrowPeak file_size 1,643,127 downloaded_date 06/12/2022 release_date 11/20/2020 date_added_to_filer 08/22/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF757GFS.bed.gz processed_file_md5 eb32f04a8af1cb9c1de4788768a57400 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF757GFS.bed.gz -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF757GFS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF757GFS/@@download/ENCFF757GFS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF757GFS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 ba8f9f9ae93ad62a23e64951bfcf284d data_category Histone ChIP-seq peaks Genomic feature type Histone ChIP-seq H2BK15ac replicated peaks track_description version=2024;Biosample_summary=Homo sapiens IMR-90;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv2;Life_stage_age=embryonic 16 weeks;Reference=NR;External_resources=GEO:GSM521875,GEO:GSM521877,GEO:GSM521878;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=rep2_vs_rep3.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=IMR-90;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=IMR90;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;Bio_rep=1, 2, 3;Tech_rep=1_1, 2_2, 3_1;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no;narrowPeak_filter=qValueLog10 system_category Respiratory life_stage Embryonic track_name ENCODE IMR-90 (repl. 2, 3) Histone ChIP-seq H2BK15ac replicated peaks (narrowPeak) [Experiment: ENCSR274TJB] [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • IMR-90 NGRMP2GRDM3EVC • ROADMAP [lifted]25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMP2GRDM3EVC data_source ROADMAP-lifted Download track Download number_of_intervals 112,026 bp_covered 232,669,878 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK15ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 6,073,770 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK15ac.YL19.gappedPeak.lifted.bed.gz processed_file_md5 15d704043cb3522bca2badeaab68c30b wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK15ac.YL19.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK15ac.YL19.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.IMR90.H2BK15ac.YL19.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.IMR90.H2BK15ac.YL19.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 61527599be2fd66c1efc8f5195708a8e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK15ac peaks track_description version=2015;Original_cell_type=IMR 90;Donor=YL19;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP-lifted IMR-90 ChIP-seq H2BK15ac-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H2BK15ac • Neuronal progenitor cell NGRMP4ENIKQRMU • ROADMAP [lifted]25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMP4ENIKQRMU data_source ROADMAP-lifted Download track Download number_of_intervals 1,043,394 bp_covered 691,227,508 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK15ac assay ChIP-seq file_format bed broadPeak-lifted file_size 34,020,327 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.CY9.broadPeak.lifted.bed.gz processed_file_md5 97cf80f62f9a53f92fe4726544756dd7 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.CY9.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.CY9.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.CY9.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.CY9.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 02cc130b29da4c2eb91e4f59900938df data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK15ac peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=CY9;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP-lifted Neuronal progenitor cell ChIP-seq H2BK15ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • IMR-90 NGRMP5B4K52T2Y • ROADMAP [lifted]25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMP5B4K52T2Y data_source ROADMAP-lifted Download track Download number_of_intervals 117,218 bp_covered 194,364,442 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK15ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 5,964,132 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK15ac.SK42.gappedPeak.lifted.bed.gz processed_file_md5 87a0b2bcd103ce0c9e815e24f26e5976 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK15ac.SK42.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK15ac.SK42.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.IMR90.H2BK15ac.SK42.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.IMR90.H2BK15ac.SK42.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 cfbcb0430e5af223b86179116bc49681 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK15ac peaks track_description version=2015;Original_cell_type=IMR 90;Donor=SK42;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP-lifted IMR-90 ChIP-seq H2BK15ac-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H2BK15ac • Mesendoderm NGRMP5N2HZLMHO • ROADMAP [lifted]25693563 ChIP-seq Mesendoderm Histone Show metadata Download track Track metadata identifier NGRMP5N2HZLMHO data_source ROADMAP-lifted Download track Download number_of_intervals 611,040 bp_covered 620,945,867 output_type peaks genome_build hg38 cell_type Mesendoderm biosample_type In vitro differentiated cells biosample_term_id BTO:0003953 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK15ac assay ChIP-seq file_format bed broadPeak-lifted file_size 19,780,459 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK15ac.AK418.broadPeak.lifted.bed.gz processed_file_md5 c6bbf7ae12c22769bd3345dbcb63475c wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK15ac.AK418.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK15ac.AK418.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK15ac.AK418.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_BMP4_Derived_Mesendoderm_Cultured_Cells.H2BK15ac.AK418.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 a1831f8c924bbd1b66ffa5b8675affb1 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK15ac peaks track_description version=2015;Original_cell_type=H1 BMP4 Derived Mesendoderm Cultured Cells;Donor=AK418;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=NTR:0000856;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted Mesendoderm ChIP-seq H2BK15ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • IMR-90 NGRMPB2E2KA4RE • ROADMAP [lifted]25693563 ChIP-seq IMR-90 Histone Show metadata Download track Track metadata identifier NGRMPB2E2KA4RE data_source ROADMAP-lifted Download track Download number_of_intervals 70,533 bp_covered 119,663,384 output_type peaks genome_build hg38 cell_type IMR-90 biosample_type Cell line biosample_term_id EFO:0001196 tissue_category Lung encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK15ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,391,388 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK15ac.YL69.gappedPeak.lifted.bed.gz processed_file_md5 b8f07fa7ae17e22d97622b7b04442371 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK15ac.YL69.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.IMR90.H2BK15ac.YL69.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.IMR90.H2BK15ac.YL69.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.IMR90.H2BK15ac.YL69.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 b70acfd7123d1fa9add20a9bf5765e6f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK15ac peaks track_description version=2015;Original_cell_type=IMR 90;Donor=YL69;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=yes system_category Respiratory life_stage Unknown track_name ROADMAP-lifted IMR-90 ChIP-seq H2BK15ac-histone-mark peaks (gappedPeak-lifted) [Histone ChIP-seq peaks]
H2BK15ac • H9 NGRMPDDSOY5DGB • ROADMAP [lifted]25693563 ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGRMPDDSOY5DGB data_source ROADMAP-lifted Download track Download number_of_intervals 719,851 bp_covered 564,861,800 output_type peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK15ac assay ChIP-seq file_format bed broadPeak-lifted file_size 23,341,773 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H2BK15ac.AK113.broadPeak.lifted.bed.gz processed_file_md5 69bb77d0d38c899647d61f9cf974c898 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H2BK15ac.AK113.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H2BK15ac.AK113.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H9.H2BK15ac.AK113.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H9.H2BK15ac.AK113.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 b3f5c6ee17eb6fb3a8538d7670484dc7 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK15ac peaks track_description version=2015;Original_cell_type=H9;Donor=AK113;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted H9 ChIP-seq H2BK15ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • Neuronal progenitor cell NGRMPDOAUHUY3L • ROADMAP [lifted]25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMPDOAUHUY3L data_source ROADMAP-lifted Download track Download number_of_intervals 266,257 bp_covered 374,102,141 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK15ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 13,465,952 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.CY9.gappedPeak.lifted.bed.gz processed_file_md5 c1496ca7292c1970b8b7fe49db515f87 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.CY9.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.CY9.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.CY9.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.CY9.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 7210be374cc39cdcd6a22414dd7304d7 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK15ac peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=CY9;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP-lifted Neuronal progenitor cell ChIP-seq H2BK15ac-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • Neuronal progenitor cell NGRMPEEBHDDJVO • ROADMAP [lifted]25693563 ChIP-seq Neuronal progenitor cell Histone Show metadata Download track Track metadata identifier NGRMPEEBHDDJVO data_source ROADMAP-lifted Download track Download number_of_intervals 727,317 bp_covered 709,585,826 output_type peaks genome_build hg38 cell_type Neuronal progenitor cell biosample_type In vitro differentiated cells biosample_term_id CL:0000047 tissue_category Stem Cell encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK15ac assay ChIP-seq file_format bed broadPeak-lifted file_size 23,259,734 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.AK422.broadPeak.lifted.bed.gz processed_file_md5 7a7aac682e25dcd79d4bd680823e50cd wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.AK422.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.AK422.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/2/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.AK422.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H1_Derived_Neuronal_Progenitor_Cultured_Cells.H2BK15ac.AK422.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 8918716028cda10cf6ce9c7f8209103a data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK15ac peaks track_description version=2015;Original_cell_type=H1 Derived Neuronal Progenitor Cultured Cells;Donor=AK422;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=Not available;is_hg38_lifted=yes system_category Stem Cell life_stage Embryonic track_name ROADMAP-lifted Neuronal progenitor cell ChIP-seq H2BK15ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • H9 NGRMPEPDB5JQR7 • ROADMAP [lifted]25693563 ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGRMPEPDB5JQR7 data_source ROADMAP-lifted Download track Download number_of_intervals 77,670 bp_covered 133,287,030 output_type peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK15ac assay ChIP-seq file_format bed gappedPeak-lifted file_size 3,686,297 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/28/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H9.H2BK15ac.AK113.gappedPeak.lifted.bed.gz processed_file_md5 251db0401a0d5eb61fd50f2a002ac961 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H9.H2BK15ac.AK113.gappedPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/UCSD.H9.H2BK15ac.AK113.gappedPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/gappedpeak/hg38/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/gappedPeak/UCSD.H9.H2BK15ac.AK113.gappedPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/gappedpeak/UCSD.H9.H2BK15ac.AK113.gappedPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/gappedpeak/ raw_file_md5 b08d094cc84762520009dd5f5d3bef33 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK15ac peaks track_description version=2015;Original_cell_type=H9;Donor=AK113;schema=BED3+15;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted H9 ChIP-seq H2BK15ac-histone-mark peaks (gappedPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]
H2BK15ac • H9 NGRMPEWNOQEPVJ • ROADMAP [lifted]25693563 ChIP-seq H9 Histone Show metadata Download track Track metadata identifier NGRMPEWNOQEPVJ data_source ROADMAP-lifted Download track Download number_of_intervals 755,224 bp_covered 746,504,878 output_type peaks genome_build hg38 cell_type H9 biosample_type Stem cell biosample_term_id EFO:0003045 tissue_category Embryo encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H2BK15ac assay ChIP-seq file_format bed broadPeak-lifted file_size 24,286,927 downloaded_date 08/15/2018 release_date 02/08/2015 date_added_to_filer 03/27/2019 processed_file_download_url https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H2BK15ac.SK376.broadPeak.lifted.bed.gz processed_file_md5 94829e6449d6560a5b368b54b53dfd54 wget_command wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H2BK15ac.SK376.broadPeak.lifted.bed.gz -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/UCSD.H9.H2BK15ac.SK376.broadPeak.lifted.bed.gz.tbi -P GADB/Annotationtracks/hg38_lifted/RoadMap/ChIP-seq/broadpeak/hg38/3/ link_out_url https://www.roadmapepigenomics.org/ raw_file_url https://egg2.wustl.edu/roadmap/data/byFileType/peaks/unconsolidated/broadPeak/UCSD.H9.H2BK15ac.SK376.broadPeak.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ROADMAP/broadpeak/UCSD.H9.H2BK15ac.SK376.broadPeak.gz -P GADB/Annotationtracks/Downloads/ROADMAP/broadpeak/ raw_file_md5 b61072f795823a707627ef39fd3f609c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H2BK15ac peaks track_description version=2015;Original_cell_type=H9;Donor=SK376;schema=BED3+9;dataSource_pubmed_id=25693563;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ROADMAP.html;original_biosample_term_id=EFO:0003045;is_hg38_lifted=yes system_category Embryo life_stage Embryonic track_name ROADMAP-lifted H9 ChIP-seq H2BK15ac-histone-mark peaks (broadPeak-lifted) [Life stage: Embryonic] [Histone ChIP-seq peaks]