[
  {
    "identifier": "NGADB35XCTNM65",
    "data_source": "ATACdb_v1.03",
    "file_name": "Sample_0546_accessible_chromatin_regions_hg38.bed.gz",
    "number_of_intervals": 573,
    "bp_covered": 135382,
    "output_type": "accessible chromatin region",
    "genome_build": "hg38",
    "cell_type": "MCF-7",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0001203",
    "tissue_category": "Breast",
    "encode_experiment_id": "Not applicable",
    "biological_replicate": "Not applicable",
    "technical_replicate": "Not applicable",
    "antibody": "Not applicable",
    "assay": "ATAC-seq",
    "file_format": "bed narrowPeak-lifted",
    "file_size": 15893,
    "filepath": "${TARGETDIR}/FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38",
    "downloaded_date": "10/03/2023",
    "release_date": "10/18/2021",
    "date_added_to_filer": "05/20/2026",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0546_accessible_chromatin_regions_hg38.bed.gz",
    "processed_file_md5": "cd552166659185b8694c93dabe13752e",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0546_accessible_chromatin_regions_hg38.bed.gz -P ${TARGETDIR}/FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/",
    "link_out_url": "https://bio.liclab.net/ATACdb/",
    "raw_file_url": "https://bio.liclab.net/ATACdb/download/download_car_bed/Sample_0546.bed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/Sample_0546.bed -P ${TARGETDIR}/FILER2/Annotationtracks/Downloads/ATACdb/Accessible_chromatin_regions/",
    "raw_file_md5": "82f3826ab46eff5a097c6cec62a14b0b",
    "data_category": "Accessible chromatin",
    "classification": "ATAC-seq accessible chromatin region",
    "track_description": "version=v1.03;Sample_ID=Sample_0546;Biosample_Type=Cell Line;Tissue_Type=Mammary Gland;Biosample_Name=MCF7;Cancer_Type=Breast cancer;Region_Number=579;Length=136.768 kb;GEO_SRA=SRR6372040;schema=BED3+10;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ATACdb_v1.03.html;original_biosample_term_id=Not available;is_hg38_lifted=yes",
    "system_category": "Reproductive",
    "life_stage": "Unknown",
    "track_name": "ATACdb_v1.03 MCF-7 ATAC-seq accessible chromatin region (narrowPeak-lifted) [Accessible chromatin]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Accessible-chromatin-region/bed13/hg38/Sample_0546_accessible_chromatin_regions_hg38.bed.gz.tbi"
  }
]