[
  {
    "identifier": "NGADB3V2GDW46P",
    "data_source": "ATACdb_v1.03",
    "file_name": "Sample_0945_hg38_motif_binding_sites.bed.gz",
    "number_of_intervals": 30955,
    "bp_covered": 420517,
    "output_type": "transcription factor binding sites",
    "genome_build": "hg38",
    "cell_type": "T47D",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0001247",
    "tissue_category": "Breast",
    "encode_experiment_id": "Not applicable",
    "biological_replicate": "Not applicable",
    "technical_replicate": "Not applicable",
    "antibody": "Not applicable",
    "assay": "Motif finding",
    "file_format": "bed bed3+11 ATACdb-lifted",
    "file_size": 906023,
    "filepath": "${TARGETDIR}/FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38",
    "downloaded_date": "10/03/2023",
    "release_date": "10/18/2021",
    "date_added_to_filer": "05/20/2026",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0945_hg38_motif_binding_sites.bed.gz",
    "processed_file_md5": "a1775a659b11dbeb861419c5a93df7ac",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0945_hg38_motif_binding_sites.bed.gz -P ${TARGETDIR}/FILER2/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/",
    "link_out_url": "https://bio.liclab.net/ATACdb/",
    "raw_file_url": "https://bio.liclab.net/ATACdb/download/packages/Motif_scan_package.txt",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ATACdb/motif_scan/Motif_scan_package.txt -P ${TARGETDIR}/FILER2/Annotationtracks/Downloads/ATACdb/motif_scan/",
    "raw_file_md5": "b279988d9f061984cc7e422702286f7d",
    "data_category": "TFBS [Transcription Factor Binding Site]",
    "classification": "ATAC-seq transcription factor binding sites",
    "track_description": "version=v1.03;Sample_ID=Sample_0945;Biosample_Type=Cell Line;Tissue_Type=Breast;Biosample_Name=T47D;Cancer_Type=Breast cancer;Region_Number=8962;Length=3246.468 kb;GEO_SRA=SRR5800798;schema=BED3+11;dataSource_pubmed_id=33125076;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ATACdb_v1.03.html;original_biosample_term_id=EFO:0001247;is_hg38_lifted=yes",
    "system_category": "Reproductive",
    "life_stage": "Unknown",
    "track_name": "ATACdb_v1.03 T47D Motif finding transcription factor binding sites (bed3+11 ATACdb-lifted) [TFBS]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/hg38_lifted/ATACdb/ATAC-seq/Motif-overlap/bed14/hg38/Sample_0945_hg38_motif_binding_sites.bed.gz.tbi"
  }
]