[
  {
    "identifier": "NGENC2WR43RAX7",
    "data_source": "ENCODE",
    "file_name": "ENCFF606WAS.bed.gz",
    "number_of_intervals": 80669,
    "bp_covered": 75800395,
    "output_type": "pseudoreplicated peaks",
    "genome_build": "hg38",
    "cell_type": "Mid-neurogenesis radial glial cell",
    "biosample_type": "In vitro differentiated cells",
    "biosample_term_id": "CL:0000681",
    "tissue_category": "Brain",
    "encode_experiment_id": "ENCSR290EHP",
    "biological_replicate": "1, 2",
    "technical_replicate": "1_1, 2_1",
    "antibody": "H3K4me1",
    "assay": "Histone ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 1942097,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "02/25/2022",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF606WAS.bed.gz",
    "processed_file_md5": "0c1e6b3ec2fd4e3fbab8964c60ddad7d",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF606WAS.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF606WAS/@@download/ENCFF606WAS.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF606WAS.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "610da8141fbfee6c761ce6e343cd427d",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Histone ChIP-seq H3K4me1 pseudoreplicated peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens mid-neurogenesis radial glial cells stably expressing HES5 originated from H9;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2;Life_stage_age=embryonic 5 days;Reference=PMID:32728046;External_resources=GEO:GSE96028;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-05-20,2015-08-03;Submitted_track_name=pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=mid-neurogenesis radial glial cells;ENCODE_cell_slims=neural cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=NTR:0003830;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Nervous",
    "life_stage": "Embryonic",
    "track_name": "ENCODE Mid-neurogenesis radial glial cell (repl. 1, 2) Histone ChIP-seq H3K4me1 pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR290EHP] [Life stage: Embryonic] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF606WAS.bed.gz.tbi"
  }
]