[
  {
    "identifier": "NGENC35I4N2CIJ",
    "data_source": "ENCODE",
    "file_name": "ENCFF440DKP.bed.gz",
    "number_of_intervals": 25752,
    "bp_covered": 9415332,
    "output_type": "conservative IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "Neutrophil",
    "biosample_type": "Primary cell",
    "biosample_term_id": "CL:0000775",
    "tissue_category": "Blood",
    "encode_experiment_id": "ENCSR785YRL",
    "biological_replicate": "1, 2",
    "technical_replicate": "1_1, 2_1",
    "antibody": "CTCF",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 452425,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "10/10/2020",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF440DKP.bed.gz",
    "processed_file_md5": "de64dfc088eeaec14d118df4e745a566",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF440DKP.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF440DKP/@@download/ENCFF440DKP.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF440DKP.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "1932d94fbbe26d79f8e151253a7e4e62",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq CTCF conservative IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens neutrophil;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1,RegulomeDB_1_0,ENCYCLOPEDIAv2,ccre_inputv1,ENCYCLOPEDIAv1,ccre_inputv2,RegulomeDB_2_0;Life_stage_age=NR;Reference=NR;External_resources=SCREEN-GRCh38:neutrophil,FactorBook:ENCSR785YRL,GEO:GSE101279;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-12-01,2016-11-17;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=neutrophil;ENCODE_cell_slims=hematopoietic cell,leukocyte,myeloid cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=neutrophilic leukocyte,neutrophilic leucocyte,neutrocyte,neutrophil leukocyte,neutrophil leucocyte;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000775;is_hg38_lifted=no",
    "system_category": "Cardiovascular",
    "life_stage": "Unknown",
    "track_name": "ENCODE Neutrophil (repl. 1, 2) TF ChIP-seq CTCF conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR785YRL] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF440DKP.bed.gz.tbi"
  }
]