[
  {
    "identifier": "NGENC4ELEOIWUZ",
    "data_source": "ENCODE",
    "file_name": "ENCFF028KDV.bed.gz",
    "number_of_intervals": 347264,
    "bp_covered": 148458432,
    "output_type": "peaks",
    "genome_build": "hg38",
    "cell_type": "T-cell",
    "biosample_type": "Primary cell",
    "biosample_term_id": "CL:0000084",
    "tissue_category": "Immune",
    "encode_experiment_id": "ENCSR411UEL",
    "biological_replicate": 1,
    "technical_replicate": "1_1",
    "antibody": "CTCF",
    "assay": "ChIA-PET",
    "file_format": "bed narrowPeak",
    "file_size": 8915777,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38",
    "downloaded_date": "05/15/2024",
    "release_date": "05/24/2022",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/ENCFF028KDV.bed.gz",
    "processed_file_md5": "8f78b01921c6555b8ed9c10bf835c4ee",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/ENCFF028KDV.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF028KDV/@@download/ENCFF028KDV.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF028KDV.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "f99590c45311bba03787d7fd87aac951",
    "data_category": "Chromatin interactions",
    "classification": "ChIA-PET CTCF peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens activated T-cell male adult (35 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours;Lab=Charles Lee;ENCODE_internal_tags=NR;Life_stage_age=adult 35 years;Reference=NR;External_resources=GEO:GSE242624;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2022-06-29;Submitted_track_name=LHT1001.no_input_all_peaks.maxscore1000.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=activated T-cell;ENCODE_cell_slims=T cell,leukocyte,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=Lab custom GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=NTR:0000537;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Lymphatic",
    "life_stage": "Adult",
    "track_name": "ENCODE T-cell (repl. 1) ChIA-PET CTCF peaks (narrowPeak) [Experiment: ENCSR411UEL] [Life stage: Adult] [Chromatin interactions]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/ENCFF028KDV.bed.gz.tbi"
  }
]