[
  {
    "identifier": "NGENC4O264V652",
    "data_source": "ENCODE",
    "file_name": "ENCFF139TOK.bed.gz",
    "number_of_intervals": 71828,
    "bp_covered": 98959555,
    "output_type": "pseudoreplicated peaks",
    "genome_build": "hg38",
    "cell_type": "Bipolar neuron",
    "biosample_type": "In vitro differentiated cells",
    "biosample_term_id": "CL:0000103",
    "tissue_category": "Brain",
    "encode_experiment_id": "ENCSR905TYC",
    "biological_replicate": 2,
    "technical_replicate": "2_1",
    "antibody": "H3K27ac",
    "assay": "Histone ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 2114393,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2",
    "downloaded_date": "07/10/2025",
    "release_date": "02/02/2021",
    "date_added_to_filer": "07/30/2025",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF139TOK.bed.gz",
    "processed_file_md5": "611f55a101d527dcf0e3ccfaec8631cb",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF139TOK.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF139TOK/@@download/ENCFF139TOK.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF139TOK.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "a9c2b157a48e96e17bb1ac1fad35d8d2",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Histone ChIP-seq H3K27ac pseudoreplicated peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens bipolar neuron originated from GM23338 treated with 0.5 _g/mL doxycycline hyclate for 4 days;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ccre_inputv2,ccre_inputv1,ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=adult 53 years;Reference=PMID:32728046;External_resources=GEO:GSE96463,SCREEN-GRCh38:bipolar_neuron_originated_from_GM23338_treated_with_doxycycline_hyclate;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-05-04,2015-08-03;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=bipolar neuron;ENCODE_cell_slims=neural cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000103;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Nervous",
    "life_stage": "Adult",
    "track_name": "ENCODE Bipolar neuron (repl. 2) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR905TYC] [Life stage: Adult] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF139TOK.bed.gz.tbi"
  }
]