[
  {
    "identifier": "NGENC6GAMGFLVC",
    "data_source": "ENCODE",
    "file_name": "ENCFF820GNH.bed.gz",
    "number_of_intervals": 90728,
    "bp_covered": 95850350,
    "output_type": "pseudoreplicated peaks",
    "genome_build": "hg38",
    "cell_type": "HeLa-S3",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0002791",
    "tissue_category": "Female Reproductive",
    "encode_experiment_id": "ENCSR000APW",
    "biological_replicate": 1,
    "technical_replicate": "1_1",
    "antibody": "H3K4me1",
    "assay": "Histone ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 2226063,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "10/30/2020",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF820GNH.bed.gz",
    "processed_file_md5": "05c434bba5eba5b258c59d650df60be7",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF820GNH.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF820GNH/@@download/ENCFF820GNH.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF820GNH.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "c6d1f9ba9a51a7432b5f8a85a6512eea",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Histone ChIP-seq H3K4me1 pseudoreplicated peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens HeLa-S3;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2;Life_stage_age=adult 31 years;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH001750,GEO:GSM798322;Project=ENCODE;Award=U54HG004570;Experiment_date_released=2012-03-06,2011-02-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HeLa-S3;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002791;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Reproductive",
    "life_stage": "Adult",
    "track_name": "ENCODE HeLa-S3 (repl. 1) Histone ChIP-seq H3K4me1 pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR000APW] [Life stage: Adult] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF820GNH.bed.gz.tbi"
  }
]