[
  {
    "identifier": "NGENC7H3YUSGLV",
    "data_source": "ENCODE",
    "file_name": "ENCFF680JIN.bed.gz",
    "number_of_intervals": 93174,
    "bp_covered": 130513070,
    "output_type": "pseudoreplicated peaks",
    "genome_build": "hg38",
    "cell_type": "CD4+ alpha-beta naive T cell",
    "biosample_type": "Primary cell",
    "biosample_term_id": "CL:0000895",
    "tissue_category": "Blood",
    "encode_experiment_id": "ENCSR855OKE",
    "biological_replicate": 1,
    "technical_replicate": "1_1, 1_2, 1_3, 1_4",
    "antibody": "H3K27ac",
    "assay": "Mint-ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 2724775,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38",
    "downloaded_date": "06/12/2022",
    "release_date": "03/31/2022",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF680JIN.bed.gz",
    "processed_file_md5": "353b5263b98233280c0aa4928cd79cd0",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF680JIN.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF680JIN/@@download/ENCFF680JIN.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF680JIN.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "4128e0d7b8aa0d1496c5c19d4403047a",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Mint-ChIP-seq H3K27ac pseudoreplicated peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (50 years) treated with 50 U/mL Interleukin-2 for 72 hours, anti-CD3 and anti-CD28 coated beads for 72 hours;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=NR;Life_stage_age=adult 50 years;Reference=NR;External_resources=GEO:GSE209373;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-04-27,2022-04-26;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated naive CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=NTR:0000497;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Cardiovascular",
    "life_stage": "Adult",
    "track_name": "ENCODE CD4+ alpha-beta naive T cell (repl. 1) Mint-ChIP-seq H3K27ac-histone-mark pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR855OKE] [Life stage: Adult] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF680JIN.bed.gz.tbi"
  }
]