[
  {
    "identifier": "NGENC7RYFELLRD",
    "data_source": "ENCODE",
    "file_name": "ENCFF925JJY.bed.gz",
    "number_of_intervals": 43600,
    "bp_covered": 7530718,
    "output_type": "IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "AG04449",
    "biosample_type": "Cell line",
    "biosample_term_id": "CLO:0034837",
    "tissue_category": "Skin",
    "encode_experiment_id": "ENCSR000DPG",
    "biological_replicate": 2,
    "technical_replicate": "2_1",
    "antibody": "CTCF",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 764099,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2",
    "downloaded_date": "06/12/2022",
    "release_date": "09/26/2020",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF925JJY.bed.gz",
    "processed_file_md5": "03a1a76517c802b64964c6aa69d2441e",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF925JJY.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF925JJY/@@download/ENCFF925JJY.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF925JJY.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "6fe1be68c898b7ec8996e1faae8c8d35",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq CTCF IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens AG04449;Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=embryonic 12 weeks;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000DPG,UCSC-ENCODE-hg19:wgEncodeEH000975,SCREEN-GRCh38:fibroblast_of_upper_leg_skin_male_embryo_12_weeks,GEO:GSM749695;Project=ENCODE;Award=U54HG004592;Experiment_date_released=2011-03-17;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=AG04449;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=AG04449;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CLO:0034837;is_hg38_lifted=no",
    "system_category": "Integumentary",
    "life_stage": "Embryonic",
    "track_name": "ENCODE AG04449 (repl. 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DPG] [Life stage: Embryonic] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF925JJY.bed.gz.tbi"
  }
]