[
  {
    "identifier": "NGENCAIP7EVT2W",
    "data_source": "ENCODE",
    "file_name": "ENCFF235UBX.bed.gz",
    "number_of_intervals": 31349,
    "bp_covered": 4635150,
    "output_type": "IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "SK-N-SH",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0003072",
    "tissue_category": "Brain",
    "encode_experiment_id": "ENCSR000BLX",
    "biological_replicate": 2,
    "technical_replicate": "2_1",
    "antibody": "CTCF",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 499216,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3",
    "downloaded_date": "07/10/2025",
    "release_date": "09/26/2020",
    "date_added_to_filer": "07/30/2025",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF235UBX.bed.gz",
    "processed_file_md5": "d7231d4cb2637daa3801bb3d66e882bf",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF235UBX.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF235UBX/@@download/ENCFF235UBX.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF235UBX.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "56b4174eb3c8c8bd842c8b48e4833608",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq CTCF IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens SK-N-SH treated with 6 _M all-trans-retinoic acid for 48 hours;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 4 years;Reference=NR;External_resources=FactorBook:ENCSR000BLX,GEO:GSM803333,UCSC-ENCODE-hg19:wgEncodeEH001613,SCREEN-GRCh38:SK-N-SH_treated_with_all-trans-retinoic_acid;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2011-07-18;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=SK-N-SH;ENCODE_cell_slims=neuroblastoma cell,cancer cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=SKNSH;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003072;is_hg38_lifted=no",
    "system_category": "Nervous",
    "life_stage": "Child",
    "track_name": "ENCODE SK-N-SH (repl. 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BLX] [Life stage: Child] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF235UBX.bed.gz.tbi"
  }
]