[
  {
    "identifier": "NGENCB3TT7XA2J",
    "data_source": "ENCODE",
    "file_name": "ENCFF488JJM.bed.gz",
    "number_of_intervals": 34412,
    "bp_covered": 14433110,
    "output_type": "IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "K562",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0002067",
    "tissue_category": "Blood",
    "encode_experiment_id": "ENCSR996SKD",
    "biological_replicate": 3,
    "technical_replicate": "3_1",
    "antibody": "CXXC5",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 667376,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3",
    "downloaded_date": "05/15/2024",
    "release_date": "06/11/2022",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF488JJM.bed.gz",
    "processed_file_md5": "31170b0dc1763335ec9dd203b1d71e41",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF488JJM.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF488JJM/@@download/ENCFF488JJM.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF488JJM.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "7d036eac54f947b76be39b7977167cb6",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens K562 genetically modified (insertion) using CRISPR targeting H. sapiens CXXC5;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE209143;Project=ENCODE;Award=UM1HG009442;Experiment_date_released=2022-06-29,2020-08-03,2020-06-30;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=K562;ENCODE_cell_slims=hematopoietic cell,cancer cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=K-562, K562 cell,K-562 cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=[Method:CRISPR|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002067;is_hg38_lifted=no",
    "system_category": "Cardiovascular",
    "life_stage": "Adult",
    "track_name": "ENCODE K562 (repl. 3) TF ChIP-seq CXXC5 IDR thresholded peaks (narrowPeak) [Experiment: ENCSR996SKD] [Life stage: Adult] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF488JJM.bed.gz.tbi"
  }
]