[
  {
    "identifier": "NGENCBZD2UOFA3",
    "data_source": "ENCODE",
    "file_name": "ENCFF768LFO.bed.gz",
    "number_of_intervals": 61246,
    "bp_covered": 71864246,
    "output_type": "pseudoreplicated peaks",
    "genome_build": "hg38",
    "cell_type": "Neurosphere",
    "biosample_type": "Stem cell",
    "biosample_term_id": "NCIT:C172261",
    "tissue_category": "Stem Cell",
    "encode_experiment_id": "ENCSR379WXM",
    "biological_replicate": 1,
    "technical_replicate": "1_1",
    "antibody": "H3K27ac",
    "assay": "Histone ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 1699038,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "01/29/2021",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF768LFO.bed.gz",
    "processed_file_md5": "b94d25ffb15a7683128b39c3d81e0ae4",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF768LFO.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF768LFO/@@download/ENCFF768LFO.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF768LFO.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "a0bca47c278e5d0b2848d2fe02d11522",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Histone ChIP-seq H3K27ac pseudoreplicated peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens neurosphere embryo (15 weeks) originated from ganglionic eminence;Lab=Joseph Costello, UCSF;ENCODE_internal_tags=ccre_inputv2,RegulomeDB_2_2,dbGaP,ENCYCLOPEDIAv2;Life_stage_age=embryonic 15 weeks;Reference=PMID:32728046;External_resources=SCREEN-GRCh38:neurosphere_embryo_15_weeks_originated_from_ganglionic_eminence_donor_ENCDO594MAO,GEO:GSM1127083;Project=Roadmap;Award=U01ES017154;Experiment_date_released=2013-07-31;Submitted_track_name=NR;ENCODE_preferred_default=true;ENCODE_biosample_term_name=neurosphere;ENCODE_cell_slims=stem cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.7.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=NTR:0000427;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Stem Cell",
    "life_stage": "Embryonic",
    "track_name": "ENCODE Neurosphere (repl. 1) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR379WXM] [Life stage: Embryonic] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF768LFO.bed.gz.tbi"
  }
]