[
  {
    "identifier": "NGENCECO3QFKEM",
    "data_source": "ENCODE",
    "file_name": "ENCFF663QZY.bed.gz",
    "number_of_intervals": 76696,
    "bp_covered": 15017434,
    "output_type": "peaks",
    "genome_build": "hg38",
    "cell_type": "H1-hESC",
    "biosample_type": "Stem cell",
    "biosample_term_id": "EFO:0003042",
    "tissue_category": "Embryo",
    "encode_experiment_id": "ENCSR130EML",
    "biological_replicate": "1, 2",
    "technical_replicate": "1_1, 2_1",
    "antibody": "H3K4ac",
    "assay": "Histone ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 1615745,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2",
    "downloaded_date": "06/10/2020",
    "release_date": "02/17/2017",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF663QZY.bed.gz",
    "processed_file_md5": "d11250386447ca4bdead2760da25c81d",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF663QZY.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF663QZY/@@download/ENCFF663QZY.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF663QZY.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "d082136bd0f958a16f41cf20a9f5eb02",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Histone ChIP-seq H3K4ac peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens H1;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSM605311,GEO:GSM667624;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=pool.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=H1;ENCODE_cell_slims=stem cell,embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=H1;Analysis_title=ENCODE3 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0003042;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Embryo",
    "life_stage": "Embryonic",
    "track_name": "ENCODE H1-hESC (repl. 1, 2) Histone ChIP-seq H3K4ac peaks (narrowPeak) [Experiment: ENCSR130EML] [Life stage: Embryonic] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/2/ENCFF663QZY.bed.gz.tbi"
  }
]