[
  {
    "identifier": "NGENCEOUJOXLJG",
    "data_source": "ENCODE",
    "file_name": "ENCFF544TFP.bed.gz",
    "number_of_intervals": 513828,
    "bp_covered": 208785040,
    "output_type": "peaks",
    "genome_build": "hg38",
    "cell_type": "Calu3",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0002819",
    "tissue_category": "Lung",
    "encode_experiment_id": "ENCSR723YJG",
    "biological_replicate": 2,
    "technical_replicate": "2_1",
    "antibody": "CTCF",
    "assay": "ChIA-PET",
    "file_format": "bed narrowPeak",
    "file_size": 12654834,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38",
    "downloaded_date": "05/15/2024",
    "release_date": "05/06/2022",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/ENCFF544TFP.bed.gz",
    "processed_file_md5": "cdf629689e50c0f3d022fade4acd61d0",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/ENCFF544TFP.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF544TFP/@@download/ENCFF544TFP.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF544TFP.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "e12b128aa813e8a1ea086509610c9425",
    "data_category": "Chromatin interactions",
    "classification": "ChIA-PET CTCF peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens Calu3;Lab=Charles Lee;ENCODE_internal_tags=Deeply Profiled;Life_stage_age=adult 25 years;Reference=NR;External_resources=GEO:GSE242650;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2022-06-27;Submitted_track_name=LHC0009.no_input_all_peaks.maxscore1000.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=Calu3;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=NR;Analysis_title=Lab custom GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002819;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Respiratory",
    "life_stage": "Adult",
    "track_name": "ENCODE Calu3 (repl. 2) ChIA-PET CTCF peaks (narrowPeak) [Experiment: ENCSR723YJG] [Life stage: Adult] [Chromatin interactions]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/narrowPeak/hg38/ENCFF544TFP.bed.gz.tbi"
  }
]