[
  {
    "identifier": "NGENCEVMRUERKI",
    "data_source": "ENCODE",
    "file_name": "ENCFF859AKQ.bed.gz",
    "number_of_intervals": 15296,
    "bp_covered": 5955723,
    "output_type": "IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "Ovary",
    "biosample_type": "Tissue",
    "biosample_term_id": "NCIT:C12404",
    "tissue_category": "Female Reproductive",
    "encode_experiment_id": "ENCSR934GQS",
    "biological_replicate": 1,
    "technical_replicate": "1_1, 1_2",
    "antibody": "CTCF",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 250501,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2",
    "downloaded_date": "06/12/2022",
    "release_date": "06/06/2022",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF859AKQ.bed.gz",
    "processed_file_md5": "5050a0a25b2ef2a0d655a6cec287e6f1",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF859AKQ.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF859AKQ/@@download/ENCFF859AKQ.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF859AKQ.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "e96578758857df792de512563f0ad892",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq CTCF IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens ovary tissue female adult (41 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 41 years;Reference=NR;External_resources=GEO:GSE208914;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-06-09,2022-06-07;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=ovary;ENCODE_cell_slims=NR;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=gonad of female reproductive system,gonada of genitalia of female organism,female reproductive system gonada,gonada of female reproductive system,female organism genitalia gonad,gonad of genitalia of female organism,reproductive system of female organism gonada,gonad of female organism genitalia,gonad of reproductive system of female organism,female gonad,gonada of female organism reproductive system,female organism reproductive system gonada,gonada of female organism genitalia,female organism genitalia gonada,genitalia of female organism gonad,ovum-producing ovary,animal ovary,gonad of female organism reproductive system,reproductive system of female organism gonad,genitalia of female organism gonada,female organism reproductive system gonad,gonada of reproductive system of female organism,female reproductive system gonad;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0000992;is_hg38_lifted=no",
    "system_category": "Reproductive",
    "life_stage": "Adult",
    "track_name": "ENCODE Ovary (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR934GQS] [Life stage: Adult] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF859AKQ.bed.gz.tbi"
  }
]