[
  {
    "identifier": "NGENCFNC55DPOB",
    "data_source": "ENCODE",
    "file_name": "ENCFF398CGL.bed.gz",
    "number_of_intervals": 10324,
    "bp_covered": 4599815,
    "output_type": "conservative IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "A549",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0001086",
    "tissue_category": "Lung",
    "encode_experiment_id": "ENCSR886OEO",
    "biological_replicate": "2, 3",
    "technical_replicate": "2_1, 3_1",
    "antibody": "EP300",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 179225,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "01/03/2021",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF398CGL.bed.gz",
    "processed_file_md5": "eec59c5aba92521dfe6805b9417d30b2",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF398CGL.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF398CGL/@@download/ENCFF398CGL.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF398CGL.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "59ef65fe97289d1904db10b998dc32b6",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq conservative IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens A549;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=FactorBook:ENCSR886OEO,GEO:GSE175290;Project=GGR;Award=U01HG007900;Experiment_date_released=2017-10-19;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no",
    "system_category": "Respiratory",
    "life_stage": "Adult",
    "track_name": "ENCODE A549 (repl. 2, 3) TF ChIP-seq EP300 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR886OEO] [Life stage: Adult] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF398CGL.bed.gz.tbi"
  }
]