[
  {
    "identifier": "NGENCGNZ5YY2PW",
    "data_source": "ENCODE",
    "file_name": "ENCFF887MRH.bed.gz",
    "number_of_intervals": 45432,
    "bp_covered": 9480566,
    "output_type": "conservative IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "IMR-90",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0001196",
    "tissue_category": "Lung",
    "encode_experiment_id": "ENCSR000EFI",
    "biological_replicate": "1, 2",
    "technical_replicate": "1_1, 2_1",
    "antibody": "CTCF",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 826354,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2",
    "downloaded_date": "06/12/2022",
    "release_date": "09/25/2020",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF887MRH.bed.gz",
    "processed_file_md5": "f67711cad68e9d5ac3915aa3b3c95a29",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF887MRH.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF887MRH/@@download/ENCFF887MRH.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF887MRH.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "bcc6ec6bf8eb43a0f8c195052c37b775",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq CTCF conservative IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens IMR-90;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=embryonic 16 weeks;Reference=PMID:32728046;External_resources=UCSC-ENCODE-hg19:wgEncodeEH002831,GEO:GSM935404,SCREEN-GRCh38:IMR-90_female_embryo_16_weeks,FactorBook:ENCSR000EFI;Project=ENCODE;Award=U54HG004558;Experiment_date_released=2012-05-14;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=IMR-90;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=IMR90;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001196;is_hg38_lifted=no",
    "system_category": "Respiratory",
    "life_stage": "Embryonic",
    "track_name": "ENCODE IMR-90 (repl. 1, 2) TF ChIP-seq CTCF conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000EFI] [Life stage: Embryonic] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF887MRH.bed.gz.tbi"
  }
]