[
  {
    "identifier": "NGENCHKUZPSMRC",
    "data_source": "ENCODE",
    "file_name": "ENCFF107HRG.bed.gz",
    "number_of_intervals": 33156,
    "bp_covered": 6968531,
    "output_type": "IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "Endothelial cell",
    "biosample_type": "Primary cell",
    "biosample_term_id": "CL:0000115",
    "tissue_category": "Umbilical Cord",
    "encode_experiment_id": "ENCSR000DVP",
    "biological_replicate": 1,
    "technical_replicate": "1_1",
    "antibody": "CTCF",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 581624,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "09/25/2020",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF107HRG.bed.gz",
    "processed_file_md5": "bd8f98be297dda4c2717b1907e16e5df",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF107HRG.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF107HRG/@@download/ENCFF107HRG.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF107HRG.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "c18ce228e71b3457a1b3aa1950993fdc",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq CTCF IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens endothelial cell of umbilical vein newborn;Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM749749,UCSC-ENCODE-hg19:wgEncodeEH000410,FactorBook:ENCSR000DVP;Project=ENCODE;Award=U54HG004592;Experiment_date_released=2011-03-17;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=endothelial cell of umbilical vein;ENCODE_cell_slims=endothelial cell,epithelial cell;ENCODE_system_slims=reproductive system,circulatory system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002618;is_hg38_lifted=no",
    "system_category": "Embryo",
    "life_stage": "Newborn",
    "track_name": "ENCODE Endothelial cell (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DVP] [Life stage: Newborn] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF107HRG.bed.gz.tbi"
  }
]