[
  {
    "identifier": "NGENCK3ISY7BMZ",
    "data_source": "ENCODE",
    "file_name": "ENCFF228KAY.bed.gz",
    "number_of_intervals": 23885,
    "bp_covered": 8007317,
    "output_type": "conservative IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "HEK293",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0001182",
    "tissue_category": "Kidney",
    "encode_experiment_id": "ENCSR217HTK",
    "biological_replicate": "1, 2",
    "technical_replicate": "1_1, 2_1",
    "antibody": "ATF2",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 472737,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "08/04/2020",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF228KAY.bed.gz",
    "processed_file_md5": "1f360e2433c27cb95feeef165ebaf350",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF228KAY.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF228KAY/@@download/ENCFF228KAY.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF228KAY.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "a8002833c9decb23f9dce1dcfbf621b0",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq conservative IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens HEK293 genetically modified (insertion) using site-specific recombination targeting H. sapiens ATF2;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=FactorBook:ENCSR217HTK,GEO:GSE91583;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-10-07;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HEK293;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=excretory system;ENCODE_biosample_term_synonyms=human embryonic kidney cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=[Method:site-specific recombination|Category:insertion];schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001182;is_hg38_lifted=no",
    "system_category": "Renal",
    "life_stage": "Embryonic",
    "track_name": "ENCODE HEK293 (repl. 1, 2) TF ChIP-seq ATF2 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR217HTK] [Life stage: Embryonic] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF228KAY.bed.gz.tbi"
  }
]