[
  {
    "identifier": "NGENCMRJPHHC4W",
    "data_source": "ENCODE",
    "file_name": "ENCFF890BZS.bed.gz",
    "number_of_intervals": 16992,
    "bp_covered": 12439922,
    "output_type": "pseudoreplicated peaks",
    "genome_build": "hg38",
    "cell_type": "Substantia nigra",
    "biosample_type": "Tissue",
    "biosample_term_id": "UBERON:0002038",
    "tissue_category": "Brain",
    "encode_experiment_id": "ENCSR374OSU",
    "biological_replicate": 1,
    "technical_replicate": "1_3",
    "antibody": "H3K27me3",
    "assay": "Histone ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 337350,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "02/12/2021",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF890BZS.bed.gz",
    "processed_file_md5": "469b9729958238384ddc07b77be72aa0",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF890BZS.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF890BZS/@@download/ENCFF890BZS.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF890BZS.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "46e13c73f4ac4f913763ebee0d33d567",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Histone ChIP-seq H3K27me3 pseudoreplicated peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens substantia nigra tissue male adult (81 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,dbGaP,ENCYCLOPEDIAv2;Life_stage_age=adult 81 years;Reference=PMID:32728046;External_resources=GEO:GSM772937;Project=Roadmap;Award=U01ES017155;Experiment_date_released=2013-07-31;Submitted_track_name=NR;ENCODE_preferred_default=true;ENCODE_biosample_term_name=substantia nigra;ENCODE_cell_slims=NR;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=nucleus of basis pedunculi,Soemmering's substance;Analysis_title=ENCODE4 v1.7.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002038;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Nervous",
    "life_stage": "Adult",
    "track_name": "ENCODE Substantia nigra (repl. 1) Histone ChIP-seq H3K27me3 pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR374OSU] [Life stage: Adult] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF890BZS.bed.gz.tbi"
  }
]