[
  {
    "identifier": "NGENCNZ3IKYCVJ",
    "data_source": "ENCODE",
    "file_name": "ENCFF315KCF.bed.gz",
    "number_of_intervals": 3819,
    "bp_covered": 4056893,
    "output_type": "pseudoreplicated peaks",
    "genome_build": "hg38",
    "cell_type": "Gastrocnemius medialis",
    "biosample_type": "Tissue",
    "biosample_term_id": "UBERON:0011907",
    "tissue_category": "Skeletal Muscle",
    "encode_experiment_id": "ENCSR453MSI",
    "biological_replicate": 2,
    "technical_replicate": "2_1, 2_2",
    "antibody": "H3K27me3",
    "assay": "Histone ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 84672,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "09/22/2020",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF315KCF.bed.gz",
    "processed_file_md5": "d232b1a6f8ead995f8d354bf1532d1a2",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF315KCF.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF315KCF/@@download/ENCFF315KCF.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF315KCF.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "a7e7b76141be9d1607a82c4dec201bfc",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Histone ChIP-seq H3K27me3 pseudoreplicated peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens gastrocnemius medialis tissue female adult (51 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENTEx;Life_stage_age=adult 51 years;Reference=NR;External_resources=GEO:GSE142979;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2019-09-11,2019-09-06;Submitted_track_name=rep2-pr1_vs_rep2-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=gastrocnemius medialis;ENCODE_cell_slims=NR;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=medial head of gastrocnemius muscle,medial head of gastrocnemius,caput mediale (musculus gastrocnemius),caput mediale musculus gastrocnemii;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0011907;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Muscular",
    "life_stage": "Adult",
    "track_name": "ENCODE Gastrocnemius medialis (repl. 2) Histone ChIP-seq H3K27me3 pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR453MSI] [Life stage: Adult] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF315KCF.bed.gz.tbi"
  }
]