[
  {
    "identifier": "NGENCOMDGGTVKH",
    "data_source": "ENCODE",
    "file_name": "ENCFF653VDQ.bed.gz",
    "number_of_intervals": 238042,
    "bp_covered": 109647778,
    "output_type": "pseudoreplicated peaks",
    "genome_build": "hg38",
    "cell_type": "type B pancreatic cell",
    "biosample_type": "In vitro differentiated cells",
    "biosample_term_id": "CL:0000169",
    "tissue_category": "Pancreas",
    "encode_experiment_id": "ENCSR315DOY",
    "biological_replicate": 1,
    "technical_replicate": "1_1, 1_2",
    "antibody": "H3K27me3",
    "assay": "Mint-ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 6255924,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38",
    "downloaded_date": "06/12/2022",
    "release_date": "06/21/2021",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF653VDQ.bed.gz",
    "processed_file_md5": "0aa92ea885f76ac4b947dd3cf2338713",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF653VDQ.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF653VDQ/@@download/ENCFF653VDQ.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF653VDQ.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "7c9a2c5a23c555d8a1c139196a0bece3",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Mint-ChIP-seq H3K27me3 pseudoreplicated peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens type B pancreatic cell;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=NR;Life_stage_age=embryonic 5 days;Reference=NR;External_resources=GEO:GSE187495;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2021-06-24,2021-04-28;Submitted_track_name=rep1-pr1_vs_rep1-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=type B pancreatic cell;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=endocrine system;ENCODE_biosample_term_synonyms=pancreatic B-cell,B-cell of pancreatic islet,pancreatic islet core,pancreatic B cell,type B enteroendocrine cell,beta cell of pancreatic islet,insulin-secreting cell,pancreatic beta cell;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000169;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Endocrine",
    "life_stage": "Embryonic",
    "track_name": "ENCODE type B pancreatic cell (repl. 1) Mint-ChIP-seq H3K27me3-histone-mark pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR315DOY] [Life stage: Embryonic] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Mint-ChIP-seq/narrowpeak/hg38/ENCFF653VDQ.bed.gz.tbi"
  }
]