[
  {
    "identifier": "NGENCONE433G7E",
    "data_source": "ENCODE",
    "file_name": "ENCFF680WYR.bed.gz",
    "number_of_intervals": 41672,
    "bp_covered": 13156709,
    "output_type": "IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "HFF-Myc",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0005710",
    "tissue_category": "Skin",
    "encode_experiment_id": "ENCSR000DUM",
    "biological_replicate": "1, 2",
    "technical_replicate": "1_1, 2_1",
    "antibody": "CTCF",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 707847,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2",
    "downloaded_date": "06/12/2022",
    "release_date": "09/25/2020",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF680WYR.bed.gz",
    "processed_file_md5": "bb72988f2bf39825cb8e2269d8f1af0c",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF680WYR.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF680WYR/@@download/ENCFF680WYR.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF680WYR.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "aa11c23a6c013eb0629c3ec7383a0f3e",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq CTCF IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens HFF-Myc originated from foreskin fibroblast;Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=SCREEN-GRCh38:HFF-Myc_male_newborn_originated_from_foreskin_fibroblast,GEO:GSM1022671,FactorBook:ENCSR000DUM,UCSC-ENCODE-hg19:wgEncodeEH001895;Project=ENCODE;Award=U54HG004592;Experiment_date_released=2012-01-17,2011-11-17;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=HFF-Myc;ENCODE_cell_slims=fibroblast,connective tissue cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=HFF_Myc,HFF cMyc,HFF Myc,HFF-cMyc,HFF_cMyc;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005710;is_hg38_lifted=no",
    "system_category": "Integumentary",
    "life_stage": "Newborn",
    "track_name": "ENCODE HFF-Myc (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DUM] [Life stage: Newborn] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF680WYR.bed.gz.tbi"
  }
]