[
  {
    "identifier": "NGENCQ2EBODCD4",
    "data_source": "ENCODE",
    "file_name": "ENCFF233NSP.bed.gz",
    "number_of_intervals": 35505,
    "bp_covered": 21102897,
    "output_type": "pseudoreplicated peaks",
    "genome_build": "hg38",
    "cell_type": "Ectodermal cell",
    "biosample_type": "In vitro differentiated cells",
    "biosample_term_id": "CL:0000221",
    "tissue_category": "Embryo",
    "encode_experiment_id": "ENCSR747HAM",
    "biological_replicate": "1, 2",
    "technical_replicate": "1_2, 2_2",
    "antibody": "H3K27ac",
    "assay": "Histone ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 814940,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "02/10/2021",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF233NSP.bed.gz",
    "processed_file_md5": "715fbc7a37b5f76280d58646644b55cc",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF233NSP.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF233NSP/@@download/ENCFF233NSP.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF233NSP.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "14fa3be61f4fe168d911f42f36b6c546",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Histone ChIP-seq H3K27ac pseudoreplicated peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens ectodermal cell originated from HUES64;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ccre_inputv2,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM1112829,SCREEN-GRCh38:ectodermal_cell_originated_from_embryonic_stem_cell,GEO:GSM1112824;Project=Roadmap;Award=U01ES017155;Experiment_date_released=2013-07-31;Submitted_track_name=NR;ENCODE_preferred_default=true;ENCODE_biosample_term_name=ectodermal cell;ENCODE_cell_slims=embryonic cell;ENCODE_system_slims=NR;ENCODE_biosample_term_synonyms=ectoderm cell;Analysis_title=ENCODE4 v1.7.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000221;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Embryo",
    "life_stage": "Embryonic",
    "track_name": "ENCODE Ectodermal cell (repl. 1, 2) Histone ChIP-seq H3K27ac pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR747HAM] [Life stage: Embryonic] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF233NSP.bed.gz.tbi"
  }
]