[
  {
    "identifier": "NGENCRQS672EOV",
    "data_source": "ENCODE",
    "file_name": "ENCFF097XYF.bed.gz",
    "number_of_intervals": 17086,
    "bp_covered": 7023901,
    "output_type": "conservative IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "Liver",
    "biosample_type": "Tissue",
    "biosample_term_id": "UBERON:0002107",
    "tissue_category": "Liver",
    "encode_experiment_id": "ENCSR205FOW",
    "biological_replicate": "1, 2",
    "technical_replicate": "1_1, 2_1",
    "antibody": "ATF3",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 322571,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "12/08/2020",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF097XYF.bed.gz",
    "processed_file_md5": "5ed65635dda83bacb89b2e97a8a03262",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF097XYF.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF097XYF/@@download/ENCFF097XYF.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF097XYF.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "1e03d1bb7c4cd9e2d9a280a185c5de40",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq conservative IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens liver tissue female child (4 years);Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 4 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR205FOW,GEO:GSE95983;Project=ENCODE;Award=U54HG006998;Experiment_date_released=2016-03-31,2016-01-29;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=liver;ENCODE_cell_slims=NR;ENCODE_system_slims=exocrine system,endocrine system,digestive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002107;is_hg38_lifted=no",
    "system_category": "Digestive",
    "life_stage": "Child",
    "track_name": "ENCODE Liver (repl. 1, 2) TF ChIP-seq ATF3 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR205FOW] [Life stage: Child] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF097XYF.bed.gz.tbi"
  }
]