[
  {
    "identifier": "NGENCT3SISEGEL",
    "data_source": "ENCODE",
    "file_name": "ENCFF939RQZ.bed.gz",
    "number_of_intervals": 85765,
    "bp_covered": 63291516,
    "output_type": "replicated peaks",
    "genome_build": "hg38",
    "cell_type": "Aorta",
    "biosample_type": "Tissue",
    "biosample_term_id": "UBERON:0000947",
    "tissue_category": "Blood Vessel",
    "encode_experiment_id": "ENCSR416CYZ",
    "biological_replicate": "1, 2",
    "technical_replicate": "1_1, 2_1",
    "antibody": "H3K4me1",
    "assay": "Histone ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 2051006,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "11/02/2020",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF939RQZ.bed.gz",
    "processed_file_md5": "5db4308cc1edfbd052b429e6e7f10b7a",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF939RQZ.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF939RQZ/@@download/ENCFF939RQZ.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF939RQZ.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "a678fe5c44e95692f64c79ce4b8bdbb7",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Histone ChIP-seq H3K4me1 replicated peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens thoracic aorta tissue male adult (54 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2,ENTEx;Life_stage_age=adult 54 years;Reference=PMID:32728046;External_resources=GEO:GSE96163;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2016-10-27,2016-06-30;Submitted_track_name=rep1_vs_rep2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=thoracic aorta;ENCODE_cell_slims=NR;ENCODE_system_slims=circulatory system;ENCODE_biosample_term_synonyms=thoracic part of aorta,aorta thoracica;Analysis_title=ENCODE4 v1.6.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0001515;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Cardiovascular",
    "life_stage": "Adult",
    "track_name": "ENCODE Aorta (repl. 1, 2) Histone ChIP-seq H3K4me1 replicated peaks (narrowPeak) [Experiment: ENCSR416CYZ] [Life stage: Adult] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF939RQZ.bed.gz.tbi"
  }
]