[
  {
    "identifier": "NGENCVU5UN5WY2",
    "data_source": "ENCODE",
    "file_name": "ENCFF288QXG.bed.gz",
    "number_of_intervals": 53607,
    "bp_covered": 25934067,
    "output_type": "pseudoreplicated peaks",
    "genome_build": "hg38",
    "cell_type": "iPS DF 6.9",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0007098",
    "tissue_category": "iPSC",
    "encode_experiment_id": "ENCSR173ZMH",
    "biological_replicate": "1, 2",
    "technical_replicate": "1_1, 2_1",
    "antibody": "H3K36me3",
    "assay": "Histone ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 1205786,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "11/20/2020",
    "date_added_to_filer": "08/22/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF288QXG.bed.gz",
    "processed_file_md5": "58d7f94f67b9455a237bb287a39af41c",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF288QXG.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF288QXG/@@download/ENCFF288QXG.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF288QXG.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "b55229847ad4b4975eb18b91de3f9b1c",
    "data_category": "Histone ChIP-seq peaks",
    "classification": "Histone ChIP-seq H3K36me3 pseudoreplicated peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens iPS DF 6.9;Lab=Bing Ren, UCSD;ENCODE_internal_tags=ENCYCLOPEDIAv1,RegulomeDB_2_2,ENCYCLOPEDIAv2;Life_stage_age=NR;Reference=PMID:32728046;External_resources=GEO:GSM706070,GEO:GSM752975;Project=Roadmap;Award=U01ES017166;Experiment_date_released=2013-07-31;Submitted_track_name=pooled-pr1_vs_pooled-pr2.overlap.bfilt.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=iPS DF 6.9;ENCODE_cell_slims=induced pluripotent stem cell,stem cell;ENCODE_system_slims=reproductive system,integumental system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.6.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://filer2.niagads.org/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0007098;is_hg38_lifted=no;narrowPeak_filter=qValueLog10",
    "system_category": "Stem Cell",
    "life_stage": "Newborn",
    "track_name": "ENCODE iPS DF 6.9 (repl. 1, 2) Histone ChIP-seq H3K36me3 pseudoreplicated peaks (narrowPeak) [Experiment: ENCSR173ZMH] [Life stage: Newborn] [Histone ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/Histone_ChIP-seq/narrowpeak/hg38/1/ENCFF288QXG.bed.gz.tbi"
  }
]