[
  {
    "identifier": "NGENCYJONGOKVA",
    "data_source": "ENCODE",
    "file_name": "ENCFF569YIT.bed.gz",
    "number_of_intervals": 41070,
    "bp_covered": 16126509,
    "output_type": "pseudoreplicated IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "Gastroesophageal sphincter",
    "biosample_type": "Tissue",
    "biosample_term_id": "UBERON:0004550",
    "tissue_category": "Digestive",
    "encode_experiment_id": "ENCSR206ETG",
    "biological_replicate": 1,
    "technical_replicate": "1_1",
    "antibody": "CTCF",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 744951,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3",
    "downloaded_date": "06/10/2020",
    "release_date": "08/11/2017",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF569YIT.bed.gz",
    "processed_file_md5": "6b1b2704003b3273b66122e879a71aa3",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF569YIT.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF569YIT/@@download/ENCFF569YIT.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF569YIT.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "0f5d23b72683d78b451a12332207d89a",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq CTCF pseudoreplicated IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens gastroesophageal sphincter tissue female adult (53 years);Lab=Michael Snyder, Stanford;ENCODE_internal_tags=ccre_inputv2,ENTEx,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 53 years;Reference=NR;External_resources=GEO:GSE127521,FactorBook:ENCSR206ETG,SCREEN-GRCh38:gastroesophageal_sphincter_female_adult_53_years;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-07-11,2016-05-18;Submitted_track_name=IDR_stable.narrowPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=gastroesophageal sphincter;ENCODE_cell_slims=NR;ENCODE_system_slims=musculature,digestive system;ENCODE_biosample_term_synonyms=gastroesophageal sphincter,inferior esophageal sphincter,gastroesophageal sphincter muscle,cardiac sphincter;Analysis_title=ENCODE3 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0004550;is_hg38_lifted=no",
    "system_category": "Digestive",
    "life_stage": "Adult",
    "track_name": "ENCODE Gastroesophageal sphincter (repl. 1) TF ChIP-seq CTCF pseudoreplicated IDR thresholded peaks (narrowPeak) [Experiment: ENCSR206ETG] [Life stage: Adult] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF569YIT.bed.gz.tbi"
  }
]