[
  {
    "identifier": "NGENCZ26MIXLX6",
    "data_source": "ENCODE",
    "file_name": "ENCFF378COF.bed.gz",
    "number_of_intervals": 8698,
    "bp_covered": 3891836,
    "output_type": "conservative IDR thresholded peaks",
    "genome_build": "hg38",
    "cell_type": "MCF-7",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0001203",
    "tissue_category": "Breast",
    "encode_experiment_id": "ENCSR360JOC",
    "biological_replicate": "1, 3",
    "technical_replicate": "1_1, 3_1",
    "antibody": "CHD1",
    "assay": "TF ChIP-seq",
    "file_format": "bed narrowPeak",
    "file_size": 175429,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1",
    "downloaded_date": "06/12/2022",
    "release_date": "03/20/2021",
    "date_added_to_filer": "08/21/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF378COF.bed.gz",
    "processed_file_md5": "5781fe345254e3c8c8adfa63fcdba6fb",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF378COF.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/",
    "link_out_url": "https://www.encodeproject.org",
    "raw_file_url": "https://www.encodeproject.org/files/ENCFF378COF/@@download/ENCFF378COF.bigBed",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF378COF.bigBed -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/ENCODE/",
    "raw_file_md5": "16d3c00958ea866074c99c936e7a7517",
    "data_category": "TF ChIP-seq peaks",
    "classification": "TF ChIP-seq conservative IDR thresholded peaks",
    "track_description": "version=2024;Biosample_summary=Homo sapiens MCF-7;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 69 years;Reference=PMID:32728046;External_resources=GEO:GSE91698;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-07-28,2014-07-07;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=MCF-7;ENCODE_cell_slims=epithelial cell,cancer cell;ENCODE_system_slims=integumental system,exocrine system;ENCODE_biosample_term_synonyms=MCF7 cell,MCF7,MCF-7 cell;Analysis_title=ENCODE4 v1.7.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001203;is_hg38_lifted=no",
    "system_category": "Reproductive",
    "life_stage": "Adult",
    "track_name": "ENCODE MCF-7 (repl. 1, 3) TF ChIP-seq CHD1 conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR360JOC] [Life stage: Adult] [TF ChIP-seq peaks]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF378COF.bed.gz.tbi"
  }
]