[
  {
    "identifier": "NGEPM3JK7MZM7P",
    "data_source": "EpiMap_Enhancers",
    "file_name": "formatted_output_BSS00267_ENCODE_2012_Enh_hg38.bed.gz",
    "number_of_intervals": 110876,
    "bp_covered": 96673800,
    "output_type": "enhancer chromatin states",
    "genome_build": "hg38",
    "cell_type": "DND-41",
    "biosample_type": "Cell line",
    "biosample_term_id": "EFO:0007074",
    "tissue_category": "Blood",
    "encode_experiment_id": "Not applicable",
    "biological_replicate": "Not reported",
    "technical_replicate": "Not applicable",
    "antibody": "consolidated",
    "assay": "ChromHMM",
    "file_format": "bed bed9",
    "file_size": 1045155,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/EpiMap_enhancers/ChromHMM/bed9/hg38",
    "downloaded_date": "10/22/2021",
    "release_date": "02/19/2021",
    "date_added_to_filer": "05/20/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/EpiMap_enhancers/ChromHMM/bed9/hg38/formatted_output_BSS00267_ENCODE_2012_Enh_hg38.bed.gz",
    "processed_file_md5": "834c7615456f192374dde48b3ae95f0c",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/EpiMap_enhancers/ChromHMM/bed9/hg38/formatted_output_BSS00267_ENCODE_2012_Enh_hg38.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/EpiMap_enhancers/ChromHMM/bed9/hg38/",
    "link_out_url": "https://personal.broadinstitute.org/cboix/epimap/ChromHMM/",
    "raw_file_url": "https://personal.broadinstitute.org/cboix/epimap/ChromHMM/observed_aux_18_hg38/CALLS/BSS00267_18_CALLS_segments.bed.gz",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/EpiMap_Enhancers/hg38/BSS00267_18_CALLS_segments.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/EpiMap_Enhancers/hg38/BSS00267_18_CALLS_segments.bed.gz",
    "raw_file_md5": "3ffb289e1008b09e2be2725e71313d11",
    "data_category": "Enhancer",
    "classification": "ChromHMM consolidated enhancer chromatin states",
    "track_description": "version=2021;Original_cell_type=DND-41;doi=https://doi.org/10.1038/s41586-020-03145-z;pubmed_id=33536621;bss_id=BSS00267;extended_md.donor.ids=ENCDO183AAA;extended_md.collated.donors=ENCDO183AAA;extended_md.accession=ENCSR000ARA,ENCSR000ARB,ENCSR000ARC,ENCSR564VIX,ENCSR000AQV,ENCSR000AQW,ENCSR000AQX,ENCSR000AQY,ENCSR000ASX,ENCSR000AQZ,ENCSR000ARY,ENCSR000ARZ;extended_md.biosample.ids=ENCBS688JZQ,ENCBS688JZQ,ENCBS282AAA,ENCBS282AAA,ENCBS439IWV;extended_md.assay=ChIP-seq;extended_md.life.stage=child;extended_md.age=13;extended_md.age.units=year;schema=BED9;dataSource_pubmed_id=33536621;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/EpiMap_Enhancers.html;original_biosample_term_id=EFO:0007074;is_hg38_lifted=no",
    "system_category": "Cardiovascular",
    "life_stage": "Child",
    "track_name": "EpiMap_Enhancers DND-41 ChromHMM consolidated enhancer chromatin states (bed9) [Life stage: Child] [Enhancer]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/EpiMap_enhancers/ChromHMM/bed9/hg38/formatted_output_BSS00267_ENCODE_2012_Enh_hg38.bed.gz.tbi"
  }
]