[
  {
    "identifier": "NGEPMOYNQPVN6S",
    "data_source": "EpiMap_Enhancers",
    "file_name": "formatted_output_BSS01380_ENCODE_Enh_hg38.bed.gz",
    "number_of_intervals": 119118,
    "bp_covered": 81997800,
    "output_type": "enhancer chromatin states",
    "genome_build": "hg38",
    "cell_type": "Neutrophil",
    "biosample_type": "Primary cell",
    "biosample_term_id": "CL:0000775",
    "tissue_category": "Blood",
    "encode_experiment_id": "Not applicable",
    "biological_replicate": "Not reported",
    "technical_replicate": "Not applicable",
    "antibody": "consolidated",
    "assay": "ChromHMM",
    "file_format": "bed bed9",
    "file_size": 1106391,
    "filepath": "${TARGETDIR}/GADB/Annotationtracks/EpiMap_enhancers/ChromHMM/bed9/hg38",
    "downloaded_date": "10/22/2021",
    "release_date": "02/19/2021",
    "date_added_to_filer": "05/20/2024",
    "processed_file_download_url": "https://filer2.niagads.org/Annotationtracks/EpiMap_enhancers/ChromHMM/bed9/hg38/formatted_output_BSS01380_ENCODE_Enh_hg38.bed.gz",
    "processed_file_md5": "5e6eb47260f352b3ee232ecfae6cf12c",
    "wget_command": "wget https://filer2.niagads.org/Annotationtracks/EpiMap_enhancers/ChromHMM/bed9/hg38/formatted_output_BSS01380_ENCODE_Enh_hg38.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/EpiMap_enhancers/ChromHMM/bed9/hg38/",
    "link_out_url": "https://personal.broadinstitute.org/cboix/epimap/ChromHMM/",
    "raw_file_url": "https://personal.broadinstitute.org/cboix/epimap/ChromHMM/observed_aux_18_hg38/CALLS/BSS01380_18_CALLS_segments.bed.gz",
    "raw_file_download": "wget https://filer2.niagads.org/Annotationtracks/Downloads/EpiMap_Enhancers/hg38/BSS01380_18_CALLS_segments.bed.gz -P ${TARGETDIR}/GADB/Annotationtracks/Downloads/EpiMap_Enhancers/hg38/BSS01380_18_CALLS_segments.bed.gz",
    "raw_file_md5": "b1a6e7e3bd69f2dfda9f452c442f322f",
    "data_category": "Enhancer",
    "classification": "ChromHMM consolidated enhancer chromatin states",
    "track_description": "version=2021;Original_cell_type=neutrophil;doi=https://doi.org/10.1038/s41586-020-03145-z;pubmed_id=33536621;bss_id=BSS01380;extended_md.donor.ids=ENCDO082FOL,ENCDO117PGW,ENCDO055UKA,ENCDO082FOL,ENCDO055UKA;extended_md.collated.donors=ENCDO082FOL,ENCDO055UKA,ENCDO082FOL,ENCDO117PGW,ENCDO082FOL;extended_md.accession=ENCSR393SYU,ENCSR373WCB,ENCSR058FCG,ENCSR524RIH,ENCSR826VJY,ENCSR267YXV;extended_md.biosample.ids=ENCBS462VZJ,ENCBS360EQL,ENCBS921VGK,ENCBS462VZJ,ENCBS360EQL;extended_md.assay=ChIP-seq;extended_md.life.stage=unknown;extended_md.age=unknown;extended_md.age.units=NR;schema=BED9;dataSource_pubmed_id=33536621;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/EpiMap_Enhancers.html;original_biosample_term_id=Not available;is_hg38_lifted=no",
    "system_category": "Cardiovascular",
    "life_stage": "Unknown",
    "track_name": "EpiMap_Enhancers Neutrophil ChromHMM consolidated enhancer chromatin states (bed9) [Enhancer]",
    "tabix_file_url": "https://filer2.niagads.org/Annotationtracks/EpiMap_enhancers/ChromHMM/bed9/hg38/formatted_output_BSS01380_ENCODE_Enh_hg38.bed.gz.tbi"
  }
]