CTCF • Caco-2 NGENCGXL2PIAMR • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Caco-2 TF Show metadata Download track Track metadata identifier NGENCGXL2PIAMR data_source ENCODE Download track Download number_of_intervals 33,112 bp_covered 6,534,173 output_type IDR thresholded peaks genome_build hg38 cell_type Caco-2 biosample_type Cell line biosample_term_id EFO:0001099 tissue_category Digestive encode_experiment_id ENCSR000DQN biological_replicate 2 technical_replicate 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 527,049 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF035TOM.bed.gz processed_file_md5 a0f2f45e659aa7289f0663c0d9e6050c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF035TOM.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF035TOM.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF035TOM/@@download/ENCFF035TOM.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF035TOM.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 3f5de7100e1b910f4c5e3ea09d33f601 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens Caco-2;Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 72 years;Reference=PMID:32728046;External_resources=GEO:GSM749748,FactorBook:ENCSR000DQN,UCSC-ENCODE-hg19:wgEncodeEH000404,SCREEN-GRCh38:Caco-2;Project=ENCODE;Award=U54HG004592;Experiment_date_released=2011-03-17,2011-02-11;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=Caco-2;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=Caco2;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001099;is_hg38_lifted=no system_category Digestive life_stage Adult track_name ENCODE Caco-2 (repl. 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DQN] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Loucy NGENCGXMHZYW62 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Loucy TF Show metadata Download track Track metadata identifier NGENCGXMHZYW62 data_source ENCODE Download track Download number_of_intervals 57,841 bp_covered 22,165,593 output_type IDR thresholded peaks genome_build hg38 cell_type Loucy biosample_type Cell line biosample_term_id EFO:0007112 tissue_category Blood encode_experiment_id ENCSR464DKE biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 1,021,299 downloaded_date 06/12/2022 release_date 10/20/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF452OFJ.bed.gz processed_file_md5 b6cb2ebf7e6f8cc83f94d0a855125a33 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF452OFJ.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF452OFJ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF452OFJ/@@download/ENCFF452OFJ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF452OFJ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 9f16dd0db31d8de7de04a941d1b53d4f data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens Loucy;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=adult 38 years;Reference=NR;External_resources=FactorBook:ENCSR464DKE,SCREEN-GRCh38:Loucy,GEO:GSE123214;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2014-09-04,2014-11-20;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=Loucy;ENCODE_cell_slims=T cell,hematopoietic cell,leukocyte;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0007112;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE Loucy (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR464DKE] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Prostate gland NGENCGXN76QVPK • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Prostate gland TF Show metadata Download track Track metadata identifier NGENCGXN76QVPK data_source ENCODE Download track Download number_of_intervals 16,368 bp_covered 7,070,031 output_type conservative IDR thresholded peaks genome_build hg38 cell_type Prostate gland biosample_type Tissue biosample_term_id UBERON:0002367 tissue_category Male Reproductive encode_experiment_id ENCSR230ORT biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 277,618 downloaded_date 06/12/2022 release_date 09/24/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF371CZS.bed.gz processed_file_md5 2a171679c7215640657484c36d550e1f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF371CZS.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF371CZS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF371CZS/@@download/ENCFF371CZS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF371CZS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 8fd055473fc563f910e6fa4d5926d281 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens prostate gland tissue male adult (54 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENTEx,RegulomeDB_2_1;Life_stage_age=adult 54 years;Reference=NR;External_resources=GEO:GSE142934,FactorBook:ENCSR230ORT;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2019-09-11,2017-08-28;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=prostate gland;ENCODE_cell_slims=NR;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=male prostate,prostate;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0002367;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE Prostate gland (repl. 1, 2) TF ChIP-seq CTCF conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR230ORT] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Transverse colon NGENCGYVSCK23P • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Transverse colon TF Show metadata Download track Track metadata identifier NGENCGYVSCK23P data_source ENCODE Download track Download number_of_intervals 26,646 bp_covered 9,373,302 output_type conservative IDR thresholded peaks genome_build hg38 cell_type Transverse colon biosample_type Tissue biosample_term_id UBERON:0001157 tissue_category Digestive encode_experiment_id ENCSR449SEF biological_replicate 1, 2 technical_replicate 1_1, 1_2, 2_1, 2_2 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 481,654 downloaded_date 06/12/2022 release_date 09/23/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF050NGX.bed.gz processed_file_md5 14d7ab15847a91c7503bf5956018d888 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF050NGX.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF050NGX.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF050NGX/@@download/ENCFF050NGX.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF050NGX.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 84fd741ae18b70736259a61a8c7e9be2 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens transverse colon tissue female adult (51 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENTEx,RegulomeDB_2_1;Life_stage_age=adult 51 years;Reference=PMCID:PMC7343189;External_resources=GEO:GSE170075,FactorBook:ENCSR449SEF;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2018-12-14;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=transverse colon;ENCODE_cell_slims=NR;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=colon transversum;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0001157;is_hg38_lifted=no system_category Digestive life_stage Adult track_name ENCODE Transverse colon (repl. 1, 2) TF ChIP-seq CTCF conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR449SEF] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Smooth muscle cell NGENCH2I2M5I7B • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Smooth muscle cell TF Show metadata Download track Track metadata identifier NGENCH2I2M5I7B data_source ENCODE Download track Download number_of_intervals 43,070 bp_covered 12,439,643 output_type IDR thresholded peaks genome_build hg38 cell_type Smooth muscle cell biosample_type In vitro differentiated cells biosample_term_id CL:0000192 tissue_category Muscle encode_experiment_id ENCSR261VAS biological_replicate 2 technical_replicate 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 751,679 downloaded_date 06/12/2022 release_date 10/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF507YSF.bed.gz processed_file_md5 3890c5d69734c8376817877e2abc43c6 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF507YSF.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF507YSF.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF507YSF/@@download/ENCFF507YSF.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF507YSF.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 2011eddf8af404d5cbd22644d3de4e4d data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens smooth muscle cell originated from H9;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_1_0,SESCC,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=embryonic 5 days;Reference=PMCID:PMC7343189;External_resources=GEO:GSE175142,SCREEN-GRCh38:smooth_muscle_cell_originated_from_H9,FactorBook:ENCSR261VAS;Project=ENCODE;Award=U54HG006991;Experiment_date_released=2017-12-03,2016-04-27;Submitted_track_name=rep2-pr1_vs_rep2-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=smooth muscle cell;ENCODE_cell_slims=smooth muscle cell;ENCODE_system_slims=musculature;ENCODE_biosample_term_synonyms=SMCs,smooth muscle fiber,myocytes, smooth muscle;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000192;is_hg38_lifted=no system_category Muscular life_stage Embryonic track_name ENCODE Smooth muscle cell (repl. 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR261VAS] [Life stage: Embryonic] [TF ChIP-seq peaks]
CTCF • CD4+ alpha-beta naive T cell NGENCH62Y6TODC • ENCODE22955616 | 41168159 | 31713622 ChIA-PET CD4+ alpha-beta naive T cell Chromatin interactions Show metadata Download track Track metadata identifier NGENCH62Y6TODC data_source ENCODE Download track Download number_of_intervals 54,365 bp_covered 40,357,463 output_type peaks genome_build hg38 cell_type CD4+ alpha-beta naive T cell biosample_type Primary cell biosample_term_id CL:0000895 tissue_category Blood encode_experiment_id ENCSR550JJT biological_replicate 1 technical_replicate 1_1 antibody CTCF assay ChIA-PET file_format bed broadPeak file_size 836,748 downloaded_date 06/12/2022 release_date 07/19/2021 date_added_to_filer 11/07/2022 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/broadPeak/hg38/ENCFF598YRJ.bed.gz processed_file_md5 68d0470f1e8cf0bf70d04957b77da501 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/broadPeak/hg38/ENCFF598YRJ.bed.gz -P GADB/Annotationtracks/ENCODE/data/ChIA-PET/broadPeak/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/ChIA-PET/broadPeak/hg38/ENCFF598YRJ.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/ChIA-PET/broadPeak/hg38/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF598YRJ/@@download/ENCFF598YRJ.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF598YRJ.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 165126b6df6427387bee16b22fd62e09 data_category Chromatin interactions Genomic feature type ChIA-PET CTCF peaks track_description version=2024;Biosample_summary=Homo sapiens activated naive CD4-positive, alpha-beta T cell male adult (43 years) treated with 10 ng/mL Interleukin-2 for 5 days, anti-CD3 and anti-CD28 coated beads for 7 days;Lab=Yijun Ruan, JAX;ENCODE_internal_tags=NR;Life_stage_age=adult 43 years;Reference=NR;External_resources=GEO:GSE187672;Project=ENCODE;Award=UM1HG009409;Experiment_date_released=2021-07-21;Submitted_track_name=LHT0051H.for.BROWSER.spp.z6.broadPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=activated naive CD4-positive, alpha-beta T cell;ENCODE_cell_slims=T cell,leukocyte,CD4+ T cell,hematopoietic cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=Lab custom GRCh38;GM=NR;schema=BED6+3;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=NTR:0000664;is_hg38_lifted=no system_category Cardiovascular life_stage Adult track_name ENCODE CD4+ alpha-beta naive T cell (repl. 1) ChIA-PET CTCF peaks (broadPeak) [Experiment: ENCSR550JJT] [Life stage: Adult] [Chromatin interactions]
CTCF • Ishikawa NGENCH65WIGLOC • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Ishikawa TF Show metadata Download track Track metadata identifier NGENCH65WIGLOC data_source ENCODE Download track Download number_of_intervals 23,809 bp_covered 5,259,213 output_type IDR thresholded peaks genome_build hg38 cell_type Ishikawa biosample_type Cell line biosample_term_id EFO:0005718 tissue_category Female Reproductive encode_experiment_id ENCSR000BQE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 430,613 downloaded_date 09/10/2024 release_date 09/26/2020 date_added_to_filer 10/01/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF516BSM.bed.gz processed_file_md5 02b4c380844083c40257e152b23bd673 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF516BSM.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF516BSM.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF516BSM/@@download/ENCFF516BSM.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF516BSM.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 efc67d0b2a8e2eede25a623c5270db2b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens Ishikawa treated with 0.02% dimethyl sulfoxide for 1 hour;Lab=Richard Myers, HAIB;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 39 years;Reference=PMID:22710073;External_resources=FactorBook:ENCSR000BQE,GEO:GSM1010774,SCREEN-GRCh38:Ishikawa_treated_with_dimethyl_sulfoxide,UCSC-ENCODE-hg19:wgEncodeEH002300;Project=ENCODE;Award=U54HG004576;Experiment_date_released=2012-02-29,2011-07-18;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=Ishikawa;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=Ishikawa cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005718;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE Ishikawa (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000BQE] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • B cell NGENCH6TDBTHBJ • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq B cell TF Show metadata Download track Track metadata identifier NGENCH6TDBTHBJ data_source ENCODE Download track Download number_of_intervals 50,778 bp_covered 27,139,493 output_type IDR thresholded peaks genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Immune encode_experiment_id ENCSR075NRV biological_replicate 1 technical_replicate 1_1, 1_2, 1_3 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 860,061 downloaded_date 06/12/2022 release_date 06/06/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF500PZO.bed.gz processed_file_md5 520016abdcf831bbf9104f35cf99a27f wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF500PZO.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF500PZO.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF500PZO/@@download/ENCFF500PZO.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF500PZO.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 47fe275893b7c5a3f8ed29b3ebd1863e data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens B cell male adult (22 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 22 years;Reference=NR;External_resources=GEO:GSE208512;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-06-09,2022-06-07;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=B cell;ENCODE_cell_slims=hematopoietic cell,leukocyte,B cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=B-cell,B-lymphocyte,B lymphocyte;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0000236;is_hg38_lifted=no system_category Lymphatic life_stage Adult track_name ENCODE B cell (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR075NRV] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Keratinocyte NGENCH7SVTMVHC • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Keratinocyte TF Show metadata Download track Track metadata identifier NGENCH7SVTMVHC data_source ENCODE Download track Download number_of_intervals 50,337 bp_covered 18,245,188 output_type IDR thresholded peaks genome_build hg38 cell_type Keratinocyte biosample_type Primary cell biosample_term_id CL:0000312 tissue_category Skin encode_experiment_id ENCSR812FNU biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 954,063 downloaded_date 07/10/2025 release_date 10/02/2020 date_added_to_filer 07/30/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF455KRO.bed.gz processed_file_md5 87ec6c92523dc80ed5a2dc3938bd6f1b wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF455KRO.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF455KRO.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF455KRO/@@download/ENCFF455KRO.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF455KRO.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 80b22815738d1ee91f59c52625c08cf0 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens foreskin keratinocyte male newborn (2-4 days) treated with 1.2 mM calcium for 5.5 days;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,RegulomeDB_2_2,RegulomeDB_2_0,RegulomeDB_2_1;Life_stage_age=newborn 2-4 days;Reference=NR;External_resources=GEO:GSE175202,FactorBook:ENCSR812FNU;Project=GGR;Award=U01HG007919;Experiment_date_released=2017-10-10;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=foreskin keratinocyte;ENCODE_cell_slims=keratinocyte,epithelial cell;ENCODE_system_slims=reproductive system,integumental system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:1001606;is_hg38_lifted=no system_category Integumentary life_stage Newborn track_name ENCODE Keratinocyte (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR812FNU] [Life stage: Newborn] [TF ChIP-seq peaks]
CTCF • Transverse colon NGENCHB2X6ACWA • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Transverse colon TF Show metadata Download track Track metadata identifier NGENCHB2X6ACWA data_source ENCODE Download track Download number_of_intervals 35,433 bp_covered 12,714,714 output_type conservative IDR thresholded peaks genome_build hg38 cell_type Transverse colon biosample_type Tissue biosample_term_id UBERON:0001157 tissue_category Digestive encode_experiment_id ENCSR907BES biological_replicate 2, 3 technical_replicate 2_1, 3_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 637,447 downloaded_date 06/12/2022 release_date 09/23/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF629SFW.bed.gz processed_file_md5 d3514659730692254b40b33c85d6e162 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF629SFW.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF629SFW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF629SFW/@@download/ENCFF629SFW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF629SFW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 a00ca41e2941d99e026244f9010fd28b data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens transverse colon tissue male adult (54 years);Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,ENTEx,RegulomeDB_2_1;Life_stage_age=adult 54 years;Reference=NR;External_resources=GEO:GSE143108,FactorBook:ENCSR907BES;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2017-08-28;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=transverse colon;ENCODE_cell_slims=NR;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=colon transversum;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0001157;is_hg38_lifted=no system_category Digestive life_stage Adult track_name ENCODE Transverse colon (repl. 2, 3) TF ChIP-seq CTCF conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR907BES] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • HCT116 NGENCHB42Q7UUJ • ENCODE22955616 | 41168159 | 31713622 ChIA-PET HCT116 Chromatin interactions Show metadata Download track Track metadata identifier NGENCHB42Q7UUJ data_source ENCODE Download track Download number_of_intervals 1,544,420 bp_covered 1,928,208,836 output_type chromatin interactions genome_build hg38 cell_type HCT116 biosample_type Cell line biosample_term_id EFO:0002824 tissue_category Digestive encode_experiment_id ENCSR326KGW biological_replicate 2 technical_replicate 2_1 antibody CTCF assay ChIA-PET file_format bed bed4+19 interact file_size 56,883,798 downloaded_date 09/20/2025 release_date 02/10/2022 date_added_to_filer 10/27/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/formatted_output_ENCFF273DQC.bed.gz processed_file_md5 f24818c0e893cb3a3887d24ea057744e wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/formatted_output_ENCFF273DQC.bed.gz -P FILER2/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/formatted_output_ENCFF273DQC.bed.gz.tbi -P FILER2/Annotationtracks/ENCODE/loops/ChIA-PET/bed4plus19_interact/hg38/ link_out_url https://www.encodeproject.org/ raw_file_url https://www.encodeproject.org/files/ENCFF273DQC/@@download/ENCFF273DQC.bedpe.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/chromatin_interaction/ENCFF273DQC.bedpe.gz -P FILER2/Annotationtracks/Downloads/ENCODE/chromatin_interaction/ raw_file_md5 8d12c9b6f4229dd841164adb4d6b30af data_category Chromatin interactions Genomic feature type ChIA-PET chromatin interactions track_description version=2024;Biosample_summary=Homo sapiens HCT116 genetically modified (insertion) using CRISPR inserting O. sativa LOC4335696, (insertion) using CRISPR targeting H. sapiens SUPT16H treated with 1 _M 5-Phenyl-1H-indole-3-acetic acid for 6 hours;Lab=Charles Lee;ENCODE_internal_tags=Degron;Life_stage_age=adult 48 years;Reference=NR;External_resources=GEO:GSE242594;Project=ENCODE;Award=3UM1HG009409-04S1;Experiment_date_released=2022-06-27;Submitted_track_name=LHH0229.e500.clusters.cis.BE3.gz;ENCODE_preferred_default=false;ENCODE_biosample_term_name=HCT116;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=digestive system;ENCODE_biosample_term_synonyms=HCT-116 cell,HCT116 cell;Analysis_title=Lab custom GRCh38;GM=[Method:CRISPR|Category:Insertion];Fragmentation_method=sonication (Branson Sonifier 250);Library_size=300-600;schema=BED4+19;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002824;is_hg38_lifted=no system_category Digestive life_stage Adult track_name ENCODE HCT116 (repl. 2) ChIA-PET CTCF chromatin interactions (bed4+19 interact) [Experiment: ENCSR326KGW] [Life stage: Adult] [Chromatin interactions]
CTCF • A549 NGENCHB5W2ZNP3 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq A549 TF Show metadata Download track Track metadata identifier NGENCHB5W2ZNP3 data_source ENCODE Download track Download number_of_intervals 40,221 bp_covered 15,100,134 output_type IDR thresholded peaks genome_build hg38 cell_type A549 biosample_type Cell line biosample_term_id EFO:0001086 tissue_category Lung encode_experiment_id ENCSR173IEA biological_replicate 1, 3 technical_replicate 1_1, 3_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 735,991 downloaded_date 09/10/2024 release_date 10/02/2020 date_added_to_filer 10/01/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF103ZAY.bed.gz processed_file_md5 e43815051ed22e939eae3c0d7e7ad806 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF103ZAY.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ENCFF103ZAY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/3/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF103ZAY/@@download/ENCFF103ZAY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF103ZAY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 77eae282603d93f89b905239656a0c50 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens A549 treated with 100 nM dexamethasone (agonist) for 7 hours;Lab=Tim Reddy, Duke;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=adult 58 years;Reference=NR;External_resources=GEO:GSE92789,FactorBook:ENCSR173IEA;Project=GGR;Award=U01HG007900;Experiment_date_released=2016-12-20;Submitted_track_name=rep1_vs_rep3.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=A549;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=respiratory system;ENCODE_biosample_term_synonyms=A-549,A549 cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;Bio_rep=1, 2, 3;Tech_rep=1_1, 2_1, 3_1;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0001086;is_hg38_lifted=no system_category Respiratory life_stage Adult track_name ENCODE A549 (repl. 1, 3) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR173IEA] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • LNCAP NGENCHBALTJ2IL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq LNCAP TF Show metadata Download track Track metadata identifier NGENCHBALTJ2IL data_source ENCODE Download track Download number_of_intervals 44,307 bp_covered 18,904,551 output_type conservative IDR thresholded peaks genome_build hg38 cell_type LNCAP biosample_type Cell line biosample_term_id EFO:0002071 tissue_category Male Reproductive encode_experiment_id ENCSR315NAC biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 800,356 downloaded_date 06/12/2022 release_date 09/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF651RFY.bed.gz processed_file_md5 1741a3685b146f96e4df820f10be64b5 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF651RFY.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF651RFY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF651RFY/@@download/ENCFF651RFY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF651RFY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 6cf8e69a2b3461db37b79aa7ce1b6b4e data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF conservative IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens LNCAP;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=adult 50 years;Reference=NR;External_resources=FactorBook:ENCSR315NAC,GEO:GSE105500,SCREEN-GRCh38:LNCAP;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-06-29,2017-03-20;Submitted_track_name=rep1_vs_rep2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=LNCAP;ENCODE_cell_slims=cancer cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=LNCAP cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0002071;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE LNCAP (repl. 1, 2) TF ChIP-seq CTCF conservative IDR thresholded peaks (narrowPeak) [Experiment: ENCSR315NAC] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Epithelial cell NGENCHBKTEXEZE • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Epithelial cell TF Show metadata Download track Track metadata identifier NGENCHBKTEXEZE data_source ENCODE Download track Download number_of_intervals 103,218 bp_covered 70,487,134 output_type IDR thresholded peaks genome_build hg38 cell_type Epithelial cell biosample_type Primary cell biosample_term_id CL:0000066 tissue_category Male Reproductive encode_experiment_id ENCSR196HOM biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 1,777,403 downloaded_date 06/12/2022 release_date 09/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF086GTI.bed.gz processed_file_md5 9996218f5f254453e3521998b119c45c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF086GTI.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF086GTI.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF086GTI/@@download/ENCFF086GTI.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF086GTI.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 c03b14c85f3bcf6d48b575ee946716c2 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens epithelial cell of prostate male;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE105383,FactorBook:ENCSR196HOM,SCREEN-GRCh38:epithelial_cell_of_prostate_male;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-06-23,2017-01-31;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=epithelial cell of prostate;ENCODE_cell_slims=epithelial cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=prostate epithelial cell;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CL:0002231;is_hg38_lifted=no system_category Reproductive life_stage Unknown track_name ENCODE Epithelial cell (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR196HOM] [TF ChIP-seq peaks]
CTCF • Skin NGENCHBN3QBM2Y • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Skin TF Show metadata Download track Track metadata identifier NGENCHBN3QBM2Y data_source ENCODE Download track Download number_of_intervals 19,264 bp_covered 5,733,537 output_type IDR thresholded peaks genome_build hg38 cell_type Skin biosample_type Tissue biosample_term_id UBERON:0002097 tissue_category Skin encode_experiment_id ENCSR756KRS biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 356,535 downloaded_date 06/12/2022 release_date 09/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF198TWE.bed.gz processed_file_md5 69462eca2e514d1f89312473edfddfe4 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF198TWE.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF198TWE.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF198TWE/@@download/ENCFF198TWE.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF198TWE.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 dc6fd59609252f8ec3ce4e0710eecb51 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens suprapubic skin tissue female adult (51 years);Lab=Michael Snyder, Stanford;ENCODE_internal_tags=ccre_inputv2,ENTEx,ENCYCLOPEDIAv2,RegulomeDB_2_1,RegulomeDB_2_2;Life_stage_age=adult 51 years;Reference=NR;External_resources=GEO:GSE105976,FactorBook:ENCSR756KRS,SCREEN-GRCh38:suprapubic_skin_female_adult_51_years;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2016-07-11,2016-05-18;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=suprapubic skin;ENCODE_cell_slims=NR;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0036149;is_hg38_lifted=no system_category Integumentary life_stage Adult track_name ENCODE Skin (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR756KRS] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • VCaP NGENCHBTQHTJX5 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq VCaP TF Show metadata Download track Track metadata identifier NGENCHBTQHTJX5 data_source ENCODE Download track Download number_of_intervals 84,598 bp_covered 52,845,432 output_type IDR thresholded peaks genome_build hg38 cell_type VCaP biosample_type Cell line biosample_term_id EFO:0007752 tissue_category Male Reproductive encode_experiment_id ENCSR265ARE biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 1,423,881 downloaded_date 06/12/2022 release_date 09/01/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF620UCW.bed.gz processed_file_md5 be5fad5115bb5a6c167e901da251022c wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF620UCW.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ENCFF620UCW.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/2/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF620UCW/@@download/ENCFF620UCW.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF620UCW.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 a4c49eb3c90a99ce899610dc91f01ca1 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens VCaP;Lab=Michael Snyder, Stanford;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ENCYCLOPEDIAv2,RegulomeDB_2_2;Life_stage_age=adult 59 years;Reference=NR;External_resources=FactorBook:ENCSR265ARE,GEO:GSE105403,SCREEN-GRCh38:VCaP;Project=ENCODE;Award=U54HG006996;Experiment_date_released=2017-07-21,2017-04-10;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=VCaP;ENCODE_cell_slims=cancer cell,epithelial cell;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0007752;is_hg38_lifted=no system_category Reproductive life_stage Adult track_name ENCODE VCaP (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR265ARE] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • D721 Med NGENCHCO7RUTAL • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq D721 Med TF Show metadata Download track Track metadata identifier NGENCHCO7RUTAL data_source ENCODE Download track Download number_of_intervals 38,891 bp_covered 7,374,458 output_type IDR thresholded peaks genome_build hg38 cell_type D721 Med biosample_type Cell line biosample_term_id EFO:0005696 tissue_category Brain encode_experiment_id ENCSR000DMY biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 637,269 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF287OPC.bed.gz processed_file_md5 d7a6e6f128b38d053bbf1bf5d6ef6aac wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF287OPC.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF287OPC.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF287OPC/@@download/ENCFF287OPC.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF287OPC.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 aac785d92c9eab50b4fe459ece1693a2 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens D721Med;Lab=Vishwanath Iyer, UTA;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=child 2 years;Reference=NR;External_resources=UCSC-ENCODE-hg19:wgEncodeEH003440,GEO:GSM1006893,FactorBook:ENCSR000DMY,SCREEN-GRCh38:medulloblastoma;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-08-27;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=D721Med;ENCODE_cell_slims=neural cell;ENCODE_system_slims=central nervous system;ENCODE_biosample_term_synonyms=D-721 Med,D-721,D-721Med,D721;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005696;is_hg38_lifted=no system_category Nervous life_stage Child track_name ENCODE D721 Med (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DMY] [Life stage: Child] [TF ChIP-seq peaks]
CTCF • AG09309 NGENCHEFCEUFDM • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq AG09309 TF Show metadata Download track Track metadata identifier NGENCHEFCEUFDM data_source ENCODE Download track Download number_of_intervals 46,137 bp_covered 11,592,452 output_type IDR thresholded peaks genome_build hg38 cell_type AG09309 biosample_type Cell line biosample_term_id CLO:0021752 tissue_category Skin encode_experiment_id ENCSR000DPP biological_replicate 1, 2 technical_replicate 1_1, 2_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 806,013 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF478XPS.bed.gz processed_file_md5 6a7cc1a9384de86276830107ae21a038 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF478XPS.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF478XPS.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF478XPS/@@download/ENCFF478XPS.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF478XPS.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 470edc5004abead933bc3ba6d0264f53 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens AG09309;Lab=John Stamatoyannopoulos, UW;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=adult 21 years;Reference=PMID:32728046;External_resources=FactorBook:ENCSR000DPP,GEO:GSM749750,UCSC-ENCODE-hg19:wgEncodeEH000977,SCREEN-GRCh38:fibroblast_of_pedal_digit_skin_female_adult_21_years;Project=ENCODE;Award=U54HG004592;Experiment_date_released=2011-03-17,2011-02-11;Submitted_track_name=pooled-pr1_vs_pooled-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=AG09309;ENCODE_cell_slims=fibroblast;ENCODE_system_slims=integumental system;ENCODE_biosample_term_synonyms=AG09309;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=CLO:0021752;is_hg38_lifted=no system_category Integumentary life_stage Adult track_name ENCODE AG09309 (repl. 1, 2) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DPP] [Life stage: Adult] [TF ChIP-seq peaks]
CTCF • Placenta NGENCHESMYB2J7 • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq Placenta TF Show metadata Download track Track metadata identifier NGENCHESMYB2J7 data_source ENCODE Download track Download number_of_intervals 46,762 bp_covered 17,031,108 output_type IDR thresholded peaks genome_build hg38 cell_type Placenta biosample_type Tissue biosample_term_id UBERON:0001987 tissue_category Placenta encode_experiment_id ENCSR291YNH biological_replicate 1 technical_replicate 1_1, 1_2 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 826,636 downloaded_date 06/12/2022 release_date 06/06/2022 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF029PHY.bed.gz processed_file_md5 f550a7a64e9fc370224bedd8dbaaef26 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF029PHY.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF029PHY.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF029PHY/@@download/ENCFF029PHY.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF029PHY.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 e6460865ce29e9542d4897ab322e3ab1 data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens placenta tissue female embryo;Lab=Bradley Bernstein, Broad;ENCODE_internal_tags=RegulomeDB_2_2,RegulomeDB_2_1;Life_stage_age=NR;Reference=NR;External_resources=GEO:GSE209465;Project=ENCODE;Award=UM1HG009390;Experiment_date_released=2022-06-09,2022-06-07;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=true;ENCODE_biosample_term_name=placenta;ENCODE_cell_slims=NR;ENCODE_system_slims=reproductive system;ENCODE_biosample_term_synonyms=eutherian placenta,allantoic placenta;Analysis_title=ENCODE4 v1.8.0 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=UBERON:0001987;is_hg38_lifted=no system_category Placental life_stage Embryonic track_name ENCODE Placenta (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR291YNH] [Life stage: Embryonic] [TF ChIP-seq peaks]
CTCF • GM10248 NGENCHG4YVBZPX • ENCODE22955616 | 41168159 | 31713622 TF ChIP-seq GM10248 TF Show metadata Download track Track metadata identifier NGENCHG4YVBZPX data_source ENCODE Download track Download number_of_intervals 31,626 bp_covered 5,376,420 output_type IDR thresholded peaks genome_build hg38 cell_type GM10248 biosample_type Cell line biosample_term_id EFO:0005334 tissue_category Blood encode_experiment_id ENCSR000DKP biological_replicate 1 technical_replicate 1_1 antibody CTCF assay TF ChIP-seq file_format bed narrowPeak file_size 566,111 downloaded_date 06/12/2022 release_date 09/26/2020 date_added_to_filer 08/21/2024 processed_file_download_url https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF382GZN.bed.gz processed_file_md5 214a0dd47aedc3ed3b7578af2502dd80 wget_command wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF382GZN.bed.gz -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ENCFF382GZN.bed.gz.tbi -P GADB/Annotationtracks/ENCODE/data/TF-ChIP-seq/narrowpeak/hg38/1/ link_out_url https://www.encodeproject.org raw_file_url https://www.encodeproject.org/files/ENCFF382GZN/@@download/ENCFF382GZN.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/ENCODE/ENCFF382GZN.bigBed -P GADB/Annotationtracks/Downloads/ENCODE/ raw_file_md5 aef9c3a50927f26fff9a74ba4f83aaae data_category TF ChIP-seq peaks Genomic feature type TF ChIP-seq CTCF IDR thresholded peaks track_description version=2024;Biosample_summary=Homo sapiens GM10248;Lab=Vishwanath Iyer, UTA;ENCODE_internal_tags=RegulomeDB_1_0,ccre_inputv2,RegulomeDB_2_0,RegulomeDB_2_1,ccre_inputv1,ENCYCLOPEDIAv2,ENCYCLOPEDIAv1,RegulomeDB_2_2;Life_stage_age=unknown 32 years;Reference=NR;External_resources=FactorBook:ENCSR000DKP,UCSC-ENCODE-hg19:wgEncodeEH003446,SCREEN-GRCh38:GM10248,GEO:GSM1006891;Project=ENCODE;Award=U54HG004563;Experiment_date_released=2012-08-27;Submitted_track_name=rep1-pr1_vs_rep1-pr2.idr0.05.bfilt.regionPeak.bb;ENCODE_preferred_default=false;ENCODE_biosample_term_name=GM10248;ENCODE_cell_slims=hematopoietic cell,leukocyte,B cell;ENCODE_system_slims=immune system;ENCODE_biosample_term_synonyms=NR;Analysis_title=ENCODE4 v1.5.1 GRCh38;GM=NR;schema=BED6+4;dataSource_pubmed_id=22955616|41168159|31713622;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/ENCODE.html;original_biosample_term_id=EFO:0005334;is_hg38_lifted=no system_category Cardiovascular life_stage Unknown track_name ENCODE GM10248 (repl. 1) TF ChIP-seq CTCF IDR thresholded peaks (narrowPeak) [Experiment: ENCSR000DKP] [TF ChIP-seq peaks]