Reference annotation (chr3) NGCADZXDOQX4CC • CADD Annotation Reference annotation (chr3) Genome annotations Show metadata identifier NGCADZXDOQX4CC data_source CADD Download track Download number_of_intervals 594,300,405 bp_covered 594,300,405 output_type CADD score genome_build hg38 cell_type Not applicable biosample_type Not applicable biosample_term_id Not applicable tissue_category Not applicable encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody Not applicable assay Annotation file_format bed bed3+4 CADDScore file_size 6,573,655,793 downloaded_date 09/20/2021 release_date 03/23/2020 date_added_to_filer 01/18/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/CADD/annotation/bed7/hg38/whole_genome_SNVs.hg38_chr3.bed.gz processed_file_md5 4faaee0dcbe77a090b6ec52735965102 wget_command wget https://filer2.niagads.org/Annotationtracks/CADD/annotation/bed7/hg38/whole_genome_SNVs.hg38_chr3.bed.gz -P FILER2/Annotationtracks/CADD/annotation/bed7/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/CADD/annotation/bed7/hg38/whole_genome_SNVs.hg38_chr3.bed.gz.tbi -P FILER2/Annotationtracks/CADD/annotation/bed7/hg38/ link_out_url https://cadd.gs.washington.edu/ raw_file_url https://krishna.gs.washington.edu/download/CADD/v1.6/GRCh38/whole_genome_SNVs.tsv.gz raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/CADD/hg38/whole_genome_SNVs.tsv.gz -P FILER2/Annotationtracks/Downloads/CADD/hg38/ raw_file_md5 faaa80ef3948cf44e56a3629a90cdaaa data_category Genome annotations Genomic feature type Annotation CADD score track_description version=v1.6;schema=BED3+4;dataSource_pubmed_id=24487276;in_trackHub=no;dataSource_acknowledgements=https://tf.lisanwanglab.org/GADB/FILER2/acknowledgements/CADD.html;original_biosample_term_id=Not applicable;is_hg38_lifted=no system_category Not applicable life_stage Not applicable track_name CADD Annotation CADD score (bed3+4 CADDScore) [Genome annotations]
H3K27ac • Large intestine NGCEE22CKNEDZ6 • CEEHRC ChIP-seq Large intestine Histone Show metadata identifier NGCEE22CKNEDZ6 data_source CEEHRC Download track Download number_of_intervals 82,703 bp_covered 96,674,519 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed bed3 file_size 674,774 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97534.CEEHRC.CEMT0052.H3K27ac.peak_calls.bed.gz processed_file_md5 587b2eccd5da69f3542c9c6c3b33282b wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97534.CEEHRC.CEMT0052.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97534.CEEHRC.CEMT0052.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97534.CEEHRC.CEMT0052.H3K27ac.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97534.CEEHRC.CEMT0052.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 6e15fc67f030571071b04e6802852c40 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon-Ascending (Right);ID=CEMT0052;disease=None;donor_id=AKCC46;donor_age=72;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001156;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=h system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K27ac-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Thyroid NGCEE234GJWHIS • CEEHRC ChIP-seq Thyroid Histone Show metadata identifier NGCEE234GJWHIS data_source CEEHRC Download track Download number_of_intervals 28,373 bp_covered 32,330,303 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 242,313 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96938.CEEHRC.CEMT0041.H3K4me3.peak_calls.bed.gz processed_file_md5 9b4400df3a1e1421fe21e1afe6095601 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96938.CEEHRC.CEMT0041.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96938.CEEHRC.CEMT0041.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/96938.CEEHRC.CEMT0041.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/96938.CEEHRC.CEMT0041.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 229892fb6ab863c551ab93e3276456c1 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0041;disease=Thyroid Adenoma-Follicular;donor_id=SW-TTP-156;donor_age=67;donor_sex=Female;sample_ontology=NCI - cancer ontology : C0205647 , NCI - anatomic site ontology : C12400 , Ontobee : UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863 system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Large intestine NGCEE24VCNCAGM • CEEHRC ChIP-seq Large intestine Histone Show metadata identifier NGCEE24VCNCAGM data_source CEEHRC Download track Download number_of_intervals 21,154 bp_covered 30,314,831 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 186,820 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97771.CEEHRC.CEMT0066.H3K4me3.peak_calls.bed.gz processed_file_md5 99df45b9db57b31646a1222e049625e7 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97771.CEEHRC.CEMT0066.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97771.CEEHRC.CEMT0066.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97771.CEEHRC.CEMT0066.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97771.CEEHRC.CEMT0066.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 3883738180e4dfad8add446f209ced8e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon-Rectosigmoid;ID=CEMT0066;disease=Large Intestine-Colon Adenocarcinoma;donor_id=AKCC70;donor_age=56;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001159;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes; system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K36me3 • Large intestine NGCEE24X7U4ZBQ • CEEHRC ChIP-seq Large intestine Histone Show metadata identifier NGCEE24X7U4ZBQ data_source CEEHRC Download track Download number_of_intervals 225,362 bp_covered 197,746,538 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K36me3 assay ChIP-seq file_format bed bed3 file_size 1,758,028 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97493.CEEHRC.CEMT0050.H3K36me3.peak_calls.bed.gz processed_file_md5 9ba948c658365599b1e4fcd00351c7e1 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97493.CEEHRC.CEMT0050.H3K36me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97493.CEEHRC.CEMT0050.H3K36me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97493.CEEHRC.CEMT0050.H3K36me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97493.CEEHRC.CEMT0050.H3K36me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 a899365bf070c547fc494debe19762ba data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K36me3 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon-Rectosigmoid;ID=CEMT0050;disease=None;donor_id=AK-DIV-01;donor_age=53;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001159;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=htt system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K36me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me1 • Large intestine NGCEE25C4IHVR7 • CEEHRC ChIP-seq Large intestine Histone Show metadata identifier NGCEE25C4IHVR7 data_source CEEHRC Download track Download number_of_intervals 176,773 bp_covered 125,461,419 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me1 assay ChIP-seq file_format bed bed3 file_size 1,404,126 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97749.CEEHRC.CEMT0065.H3K4me1.peak_calls.bed.gz processed_file_md5 edf6f0965e5cb9d61c0e639fd9c11e62 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97749.CEEHRC.CEMT0065.H3K4me1.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97749.CEEHRC.CEMT0065.H3K4me1.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97749.CEEHRC.CEMT0065.H3K4me1.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97749.CEEHRC.CEMT0065.H3K4me1.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 d1f0df226bcd3f870df9f97cceb9d82d data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me1 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon-Ascending (Right);ID=CEMT0065;disease=Large Intestine-Colon Carcinoma;donor_id=AKCC63;donor_age=84;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001156;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes; system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K4me1-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K36me3 • Stromal cell NGCEE26BIZ4M3K • CEEHRC ChIP-seq Stromal cell Histone Show metadata identifier NGCEE26BIZ4M3K data_source CEEHRC Download track Download number_of_intervals 183,629 bp_covered 83,990,424 output_type peaks genome_build hg38 cell_type Stromal cell biosample_type Primary cell biosample_term_id CL:0000499 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K36me3 assay ChIP-seq file_format bed bed3 file_size 1,475,319 downloaded_date 03/12/2021 release_date 11/06/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99022.CEEHRC.CEMT0184.H3K36me3.peak_calls.bed.gz processed_file_md5 4c23db86ccc6192d3450794391e5a7f6 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99022.CEEHRC.CEMT0184.H3K36me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99022.CEEHRC.CEMT0184.H3K36me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99022.CEEHRC.CEMT0184.H3K36me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99022.CEEHRC.CEMT0184.H3K36me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 eb020cedeb81711f14ccdf14450d6cca data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K36me3 peaks track_description version=build 2020-10;Original_cell_type=Stromal cell;ID=CEMT0184;disease=None;donor_id=22-18;donor_age=22;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000499;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GAD system_category Skeletal life_stage Adult track_name CEEHRC Stromal cell ChIP-seq H3K36me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27me3 • Occipital lobe NGCEE276ZFHDFE • CEEHRC ChIP-seq Occipital lobe Histone Show metadata identifier NGCEE276ZFHDFE data_source CEEHRC Download track Download number_of_intervals 250,897 bp_covered 145,292,087 output_type peaks genome_build hg38 cell_type Occipital lobe biosample_type Primary tissue biosample_term_id UBERON:0002021 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed bed3 file_size 1,802,399 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98457.CEEHRC.CEMT0073.H3K27me3.peak_calls.bed.gz processed_file_md5 82e1df1dde847eb62409302148aaa7b1 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98457.CEEHRC.CEMT0073.H3K27me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98457.CEEHRC.CEMT0073.H3K27me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98457.CEEHRC.CEMT0073.H3K27me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98457.CEEHRC.CEMT0073.H3K27me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 4a90ed82d0532515ce8c7a7f222664aa data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=build 2020-10;Original_cell_type=Brain-Occipetal Lobe-Right;ID=CEMT0073;disease=Brain Oligodendroglioma;donor_id=VNA175;donor_age=30;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000128;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements system_category Nervous life_stage Adult track_name CEEHRC Occipital lobe ChIP-seq H3K27me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K9me3 • Luminal epithelial cell NGCEE2C5SH4RXX • CEEHRC ChIP-seq Luminal epithelial cell Histone Show metadata identifier NGCEE2C5SH4RXX data_source CEEHRC Download track Download number_of_intervals 235,969 bp_covered 141,573,553 output_type peaks genome_build hg38 cell_type Luminal epithelial cell biosample_type Primary cell biosample_term_id CL:0002326 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K9me3 assay ChIP-seq file_format bed bed3 file_size 1,841,024 downloaded_date 03/12/2021 release_date 11/06/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98997.CEEHRC.CEMT0183.H3K9me3.peak_calls.bed.gz processed_file_md5 eb531640bdc5f5103a67a3face6b4c5a wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98997.CEEHRC.CEMT0183.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98997.CEEHRC.CEMT0183.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98997.CEEHRC.CEMT0183.H3K9me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98997.CEEHRC.CEMT0183.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 e93cef247f1713412eb627bbbca8c659 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks track_description version=build 2020-10;Original_cell_type=Luminal cell;ID=CEMT0183;disease=None;donor_id=22-18;donor_age=22;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002326;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GAD system_category Reproductive life_stage Adult track_name CEEHRC Luminal epithelial cell ChIP-seq H3K9me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Temporal lobe NGCEE2CW32UKHV • CEEHRC ChIP-seq Temporal lobe Histone Show metadata identifier NGCEE2CW32UKHV data_source CEEHRC Download track Download number_of_intervals 48,492 bp_covered 44,623,566 output_type peaks genome_build hg38 cell_type Temporal lobe biosample_type Primary tissue biosample_term_id UBERON:0001871 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed bed3 file_size 398,421 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96788.CEEHRC.CEMT0019.H3K27ac.peak_calls.bed.gz processed_file_md5 92c99c626104858ab620de648e6935c6 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96788.CEEHRC.CEMT0019.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/96788.CEEHRC.CEMT0019.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/96788.CEEHRC.CEMT0019.H3K27ac.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/96788.CEEHRC.CEMT0019.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 94e0bb6acc8a7e421005d63c8edb888f data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=build 2020-10;Original_cell_type=Brain-Temporal lobe-Left;ID=CEMT0019;disease=Brain-Temporal lobe-Left Oligodendroglioma;donor_id=VNA42;donor_age=46;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0000955;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataS system_category Nervous life_stage Adult track_name CEEHRC Temporal lobe ChIP-seq H3K27ac-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Amygdala NGCEE2G5UMTLO6 • CEEHRC ChIP-seq Amygdala Histone Show metadata identifier NGCEE2G5UMTLO6 data_source CEEHRC Download track Download number_of_intervals 139,064 bp_covered 115,932,878 output_type peaks genome_build hg38 cell_type Amygdala biosample_type Primary tissue biosample_term_id UBERON:0001876 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed bed5 file_size 1,786,294 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84607.CEEHRC.MS048201.H3K27ac.peak_calls.bed.gz processed_file_md5 bb97bfd883018d76efa14b146a94a48d wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84607.CEEHRC.MS048201.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/84607.CEEHRC.MS048201.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/84607.CEEHRC.MS048201.H3K27ac.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/84607.CEEHRC.MS048201.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 21554934720c22c881e7ff4afae71d9c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=build 2020-10;Original_cell_type=Amygdala;ID=MS048201;disease=Unknown;donor_id=McGill0482;donor_age=NA;donor_sex=Unknown;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001876;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwangla system_category Nervous life_stage Unknown track_name CEEHRC Amygdala ChIP-seq H3K27ac-histone-mark peaks (bed5) [Histone ChIP-seq peaks]
H3K9me3 • Stromal cell NGCEE2GXRTATQJ • CEEHRC ChIP-seq Stromal cell Histone Show metadata identifier NGCEE2GXRTATQJ data_source CEEHRC Download track Download number_of_intervals 226,725 bp_covered 98,070,897 output_type peaks genome_build hg38 cell_type Stromal cell biosample_type Primary cell biosample_term_id CL:0000499 tissue_category Connective Tissue encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K9me3 assay ChIP-seq file_format bed bed3 file_size 1,811,897 downloaded_date 03/12/2021 release_date 11/06/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99467.CEEHRC.CEMT0157.H3K9me3.peak_calls.bed.gz processed_file_md5 d9cd5a441ad195a4c3be43af2a70a6fb wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99467.CEEHRC.CEMT0157.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99467.CEEHRC.CEMT0157.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99467.CEEHRC.CEMT0157.H3K9me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99467.CEEHRC.CEMT0157.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 4ecb01e509eb84c80c04b7e963e0081b data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks track_description version=build 2020-10;Original_cell_type=Stromal cells;ID=CEMT0157;disease=None;donor_id=14-17;donor_age=19;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000499;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GA system_category Skeletal life_stage Adult track_name CEEHRC Stromal cell ChIP-seq H3K9me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27ac • Luminal epithelial cell NGCEE2HQQBFZW2 • CEEHRC ChIP-seq Luminal epithelial cell Histone Show metadata identifier NGCEE2HQQBFZW2 data_source CEEHRC Download track Download number_of_intervals 28,509 bp_covered 35,593,579 output_type peaks genome_build hg38 cell_type Luminal epithelial cell biosample_type Primary cell biosample_term_id CL:0002326 tissue_category Female Reproductive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27ac assay ChIP-seq file_format bed bed3 file_size 244,459 downloaded_date 03/12/2021 release_date 10/31/2019 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99318.CEEHRC.CEMT0196.H3K27ac.peak_calls.bed.gz processed_file_md5 9e08c00d73473e69eac68ded6c8f158e wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99318.CEEHRC.CEMT0196.H3K27ac.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/99318.CEEHRC.CEMT0196.H3K27ac.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/99318.CEEHRC.CEMT0196.H3K27ac.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/99318.CEEHRC.CEMT0196.H3K27ac.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 6ce517efc3a05392313494e29cde3d40 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27ac peaks track_description version=build 2020-10;Original_cell_type=Luminal cell;ID=CEMT0196;disease=None;donor_id=30-18;donor_age=46;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0002326;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/GAD system_category Reproductive life_stage Adult track_name CEEHRC Luminal epithelial cell ChIP-seq H3K27ac-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27me3 • B cell NGCEE2JZGOU5J2 • CEEHRC ChIP-seq B cell Histone Show metadata identifier NGCEE2JZGOU5J2 data_source CEEHRC Download track Download number_of_intervals 78,987 bp_covered 72,901,507 output_type peaks genome_build hg38 cell_type B cell biosample_type Primary cell biosample_term_id CL:0000236 tissue_category Immune encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed bed5 file_size 939,633 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83414.CEEHRC.MS010302.H3K27me3.peak_calls.bed.gz processed_file_md5 2fe127898e6342a705aa5814f0d4c67d wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83414.CEEHRC.MS010302.H3K27me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/83414.CEEHRC.MS010302.H3K27me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/83414.CEEHRC.MS010302.H3K27me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/83414.CEEHRC.MS010302.H3K27me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 66d14b50fde738e3b3c6db536260d7ed data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=build 2020-10;Original_cell_type=B cell;ID=MS010302;disease=Healthy;donor_id=McGill0103;donor_age=44-49;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000236;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org/ system_category Lymphatic life_stage Adult track_name CEEHRC B cell ChIP-seq H3K27me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Thyroid NGCEE2K2DJB3QB • CEEHRC ChIP-seq Thyroid Histone Show metadata identifier NGCEE2K2DJB3QB data_source CEEHRC Download track Download number_of_intervals 47,316 bp_covered 60,127,896 output_type peaks genome_build hg38 cell_type Thyroid biosample_type Primary tissue biosample_term_id UBERON:0002046 tissue_category Endocrine encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 386,461 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98737.CEEHRC.CEMT0132.H3K4me3.peak_calls.bed.gz processed_file_md5 a3514189eb6b708d673cab2358f25466 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98737.CEEHRC.CEMT0132.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98737.CEEHRC.CEMT0132.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98737.CEEHRC.CEMT0132.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98737.CEEHRC.CEMT0132.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 ad29b00ad787327fc7fad8d369059f82 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Thyroid;ID=CEMT0132;disease=None;donor_id=SW-TTP-164;donor_age=37;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0002046;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https://tf.lisanwanglab.org system_category Endocrine life_stage Adult track_name CEEHRC Thyroid ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Large intestine NGCEE2LB2INBCM • CEEHRC ChIP-seq Large intestine Histone Show metadata identifier NGCEE2LB2INBCM data_source CEEHRC Download track Download number_of_intervals 20,114 bp_covered 31,787,312 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 177,870 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97712.CEEHRC.CEMT0063.H3K4me3.peak_calls.bed.gz processed_file_md5 8279e62bd21c58836e3170c18d2b8a55 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97712.CEEHRC.CEMT0063.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97712.CEEHRC.CEMT0063.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97712.CEEHRC.CEMT0063.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97712.CEEHRC.CEMT0063.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 90284ffa70065fa1927e6128e893a76e data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon-Ascending (Right);ID=CEMT0063;disease=Large Intestine-Colon Adenocarcinoma;donor_id=AKCC52;donor_age=81;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001156;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K9me3 • Large intestine NGCEE2LPVSS5NI • CEEHRC ChIP-seq Large intestine Histone Show metadata identifier NGCEE2LPVSS5NI data_source CEEHRC Download track Download number_of_intervals 164,580 bp_covered 82,543,852 output_type peaks genome_build hg38 cell_type Large intestine biosample_type Primary tissue biosample_term_id UBERON:0000059 tissue_category Digestive encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K9me3 assay ChIP-seq file_format bed bed3 file_size 1,301,509 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97658.CEEHRC.CEMT0059.H3K9me3.peak_calls.bed.gz processed_file_md5 31ddfa9037f3d036122584d437f409ce wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97658.CEEHRC.CEMT0059.H3K9me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97658.CEEHRC.CEMT0059.H3K9me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97658.CEEHRC.CEMT0059.H3K9me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97658.CEEHRC.CEMT0059.H3K9me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 8a1871cbb2a73662043e4a5332d8c31c data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K9me3 peaks track_description version=build 2020-10;Original_cell_type=Large Intestine-Colon-Rectosigmoid;ID=CEMT0059;disease=None;donor_id=AKCC70;donor_age=56;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/UBERON_0001159;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=http system_category Digestive life_stage Adult track_name CEEHRC Large intestine ChIP-seq H3K9me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • CD4+ NGCEE2MMMA7WB6 • CEEHRC ChIP-seq CD4+ Histone Show metadata identifier NGCEE2MMMA7WB6 data_source CEEHRC Download track Download number_of_intervals 35,004 bp_covered 32,105,952 output_type peaks genome_build hg38 cell_type CD4+ biosample_type Primary cell biosample_term_id CL:0000492 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed5 file_size 457,127 downloaded_date 03/12/2021 release_date 10/19/2020 date_added_to_filer 03/06/2025 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82895.CEEHRC.MS000801.H3K4me3.peak_calls.bed.gz processed_file_md5 b1ff336e15df60f3a167894cb8ffd27a wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82895.CEEHRC.MS000801.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/82895.CEEHRC.MS000801.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed5/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/82895.CEEHRC.MS000801.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/82895.CEEHRC.MS000801.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 f546fb7707bfe24dca23bbba3631b782 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=CD4-positive helper T cell;ID=MS000801;disease=Healthy;donor_id=McGill0008;donor_age=61-66;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000492;schema=BED5;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements=https: system_category Cardiovascular life_stage Adult track_name CEEHRC CD4+ ChIP-seq H3K4me3-histone-mark peaks (bed5) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K4me3 • Occipital lobe NGCEE2OVAVMK77 • CEEHRC ChIP-seq Occipital lobe Histone Show metadata identifier NGCEE2OVAVMK77 data_source CEEHRC Download track Download number_of_intervals 50,486 bp_covered 61,424,612 output_type peaks genome_build hg38 cell_type Occipital lobe biosample_type Primary tissue biosample_term_id UBERON:0002021 tissue_category Brain encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K4me3 assay ChIP-seq file_format bed bed3 file_size 428,289 downloaded_date 03/12/2021 release_date 10/12/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98451.CEEHRC.CEMT0073.H3K4me3.peak_calls.bed.gz processed_file_md5 e26ce77684fe239bd5dc3a3ee95b6684 wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98451.CEEHRC.CEMT0073.H3K4me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/98451.CEEHRC.CEMT0073.H3K4me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/98451.CEEHRC.CEMT0073.H3K4me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/98451.CEEHRC.CEMT0073.H3K4me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 f661b5c14f485a915eb33f8f93db330d data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K4me3 peaks track_description version=build 2020-10;Original_cell_type=Brain-Occipetal Lobe-Right;ID=CEMT0073;disease=Brain Oligodendroglioma;donor_id=VNA175;donor_age=30;donor_sex=Male;sample_ontology=https://purl.obolibrary.org/obo/CL_0000128;schema=BED3;dataSource_pubmed_id=27863956;in_trackHub=yes;dataSource_acknowledgements system_category Nervous life_stage Adult track_name CEEHRC Occipital lobe ChIP-seq H3K4me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]
H3K27me3 • CD19+ B cell NGCEE2S7JO2OVQ • CEEHRC ChIP-seq CD19+ B cell Histone Show metadata identifier NGCEE2S7JO2OVQ data_source CEEHRC Download track Download number_of_intervals 484,395 bp_covered 257,870,832 output_type peaks genome_build hg38 cell_type CD19+ B cell biosample_type Primary cell biosample_term_id CL:0001201 tissue_category Blood encode_experiment_id Not applicable biological_replicate Not applicable technical_replicate Not applicable antibody H3K27me3 assay ChIP-seq file_format bed bed3 file_size 3,811,418 downloaded_date 03/12/2021 release_date 10/11/2018 date_added_to_filer 01/19/2023 processed_file_download_url https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97104.CEEHRC.CEMT0028.H3K27me3.peak_calls.bed.gz processed_file_md5 70a78c12a132967282eac3f7623295ce wget_command wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97104.CEEHRC.CEMT0028.H3K27me3.peak_calls.bed.gz -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ tabix_index_download wget https://filer2.niagads.org/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/97104.CEEHRC.CEMT0028.H3K27me3.peak_calls.bed.gz.tbi -P FILER2/Annotationtracks/IHEC/IHEC_CEEHRC/ChIP-seq/bed3/hg38/ link_out_url https://ihec-epigenomes.org/ raw_file_url https://epigenomesportal.ca/tracks/CEEHRC/hg38/97104.CEEHRC.CEMT0028.H3K27me3.peak_calls.bigBed raw_file_download wget https://filer2.niagads.org/Annotationtracks/Downloads/IHEC/CEEHRC/97104.CEEHRC.CEMT0028.H3K27me3.peak_calls.bigBed -P FILER2/Annotationtracks/Downloads/IHEC/CEEHRC/ raw_file_md5 48ac17c1c755cbd284ba3caedb889851 data_category Histone ChIP-seq peaks Genomic feature type ChIP-seq H3K27me3 peaks track_description version=build 2020-10;Original_cell_type=CD19+ cells (B lymphocytes);ID=CEMT0028;disease=Blood-Peripheral Leukemia-Chronic lymphocytic leukemia;donor_id=237-06;donor_age=79;donor_sex=Female;sample_ontology=https://purl.obolibrary.org/obo/CL_0000236;schema=BED3;dataSource_pubmed_id=27863956;in_trackH system_category Cardiovascular life_stage Adult track_name CEEHRC CD19+ B cell ChIP-seq H3K27me3-histone-mark peaks (bed3) [Life stage: Adult] [Histone ChIP-seq peaks]